Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 DUX4L17-201ENST00000557360 1267 ntBASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 TERC-201ENST00000602385 541 ntBASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4E1Q9UPM8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 PTCHD3P3-201ENST00000403073 906 ntBASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 KRT18P27-201ENST00000427733 1299 ntBASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 AC104692.2-201ENST00000603054 253 ntBASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 AC008735.5-201ENST00000623544 497 ntBASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 AC148477.8-201ENST00000624298 468 ntBASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.71■□□□□ 0.43
AP4E1Q9UPM8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
AP4E1Q9UPM8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
AP4E1Q9UPM8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
AP4E1Q9UPM8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 AP002469.2-201ENST00000531724 424 ntBASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 AL805961.1-202ENST00000641562 540 ntBASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 TUBB8P12-201ENST00000308911 1335 ntBASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 TUBB7P-202ENST00000428444 1305 ntBASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 TUBB8P7-204ENST00000567960 1332 ntBASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP4E1Q9UPM8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms