Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.29■□□□□ 0.84
ZNRF3Q9ULT6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNRF3Q9ULT6 AC007541.1-201ENST00000570282 1469 ntBASIC20.29■□□□□ 0.84
ZNRF3Q9ULT6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.29■□□□□ 0.84
ZNRF3Q9ULT6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNRF3Q9ULT6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNRF3Q9ULT6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNRF3Q9ULT6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNRF3Q9ULT6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ZNRF3Q9ULT6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 CYP2A7P1-201ENST00000595391 815 ntBASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 TEX28P1-201ENST00000613479 1221 ntBASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 TEX28P2-201ENST00000617764 1221 ntBASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF3Q9ULT6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 FOXO1B-201ENST00000504678 1527 ntBASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 LINC00896-202ENST00000609602 2128 ntBASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 AC138969.3-201ENST00000546612 1459 ntBASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 AC138932.2-201ENST00000548268 1459 ntBASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 AC126755.4-201ENST00000549796 1459 ntBASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 HLA-H-201ENST00000383620 1096 ntBASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 GPR53P-205ENST00000457298 1084 ntBASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 AL132655.2-201ENST00000596276 594 ntBASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 AL844908.2-201ENST00000609461 460 ntBASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ZNRF3Q9ULT6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ZNRF3Q9ULT6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
ZNRF3Q9ULT6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 IGHV3-71-201ENST00000523324 359 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms