Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 AL691403.2-201ENST00000618460 490 ntBASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.54■□□□□ 0.24
CUEDC1Q9NWM3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 AC105339.3-201ENST00000560043 636 ntBASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 GPR89P-201ENST00000407924 1495 ntBASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CUEDC1Q9NWM3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 TNRC18P3-201ENST00000441896 2691 ntBASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 PTCHD3P3-201ENST00000403073 906 ntBASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 PMS2P2-201ENST00000425039 1128 ntBASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 RPL13AP23-201ENST00000480739 586 ntBASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 AC140113.2-201ENST00000604370 208 ntBASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.52■□□□□ 0.24
CUEDC1Q9NWM3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CUEDC1Q9NWM3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CUEDC1Q9NWM3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CUEDC1Q9NWM3 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.52■□□□□ 0.23
CUEDC1Q9NWM3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.52■□□□□ 0.23
CUEDC1Q9NWM3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.23
CUEDC1Q9NWM3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CUEDC1Q9NWM3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CUEDC1Q9NWM3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CUEDC1Q9NWM3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CUEDC1Q9NWM3 AC243591.1-201ENST00000452967 1364 ntBASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.51■□□□□ 0.23
CUEDC1Q9NWM3 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms