Protein–RNA interactions for Protein: Q9NP55

BPIFA1, BPI fold-containing family A member 1, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA1Q9NP55 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
BPIFA1Q9NP55 AL356488.2-201ENST00000602755 427 ntBASIC17.13■□□□□ 0.33
BPIFA1Q9NP55 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.13■□□□□ 0.33
BPIFA1Q9NP55 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.13■□□□□ 0.33
BPIFA1Q9NP55 AC116407.3-201ENST00000623905 1129 ntBASIC17.13■□□□□ 0.33
BPIFA1Q9NP55 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.13■□□□□ 0.33
BPIFA1Q9NP55 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BPIFA1Q9NP55 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BPIFA1Q9NP55 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.13■□□□□ 0.33
BPIFA1Q9NP55 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BPIFA1Q9NP55 AC243591.1-201ENST00000452967 1364 ntBASIC17.13■□□□□ 0.33
BPIFA1Q9NP55 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
BPIFA1Q9NP55 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.13■□□□□ 0.33
BPIFA1Q9NP55 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BPIFA1Q9NP55 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 AC136632.2-201ENST00000512891 861 ntBASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 MIR1199-201ENST00000621445 119 ntBASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 PI4KAP1-204ENST00000612579 1703 ntBASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BPIFA1Q9NP55 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 RPS15P9-201ENST00000494093 319 ntBASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 AC093909.1-201ENST00000504731 1122 ntBASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
BPIFA1Q9NP55 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 AC117500.6-201ENST00000624871 588 ntBASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BPIFA1Q9NP55 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms