Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
VPS11Q9H270 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 AC011270.2-201ENST00000624293 2550 ntBASIC17.22■□□□□ 0.35
VPS11Q9H270 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
VPS11Q9H270 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.22■□□□□ 0.35
VPS11Q9H270 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
VPS11Q9H270 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
VPS11Q9H270 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
VPS11Q9H270 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.22■□□□□ 0.35
VPS11Q9H270 RN7SL606P-201ENST00000472779 293 ntBASIC17.22■□□□□ 0.35
VPS11Q9H270 AC122714.2-201ENST00000502787 707 ntBASIC17.22■□□□□ 0.35
VPS11Q9H270 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.22■□□□□ 0.35
VPS11Q9H270 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
VPS11Q9H270 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VPS11Q9H270 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
VPS11Q9H270 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 AL049757.1-201ENST00000616842 1596 ntBASIC17.22■□□□□ 0.35
VPS11Q9H270 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS11Q9H270 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.21■□□□□ 0.35
VPS11Q9H270 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.21■□□□□ 0.35
VPS11Q9H270 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.21■□□□□ 0.35
VPS11Q9H270 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS11Q9H270 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VPS11Q9H270 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS11Q9H270 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VPS11Q9H270 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
VPS11Q9H270 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.21■□□□□ 0.35
VPS11Q9H270 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS11Q9H270 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS11Q9H270 AC104076.2-201ENST00000448912 469 ntBASIC17.21■□□□□ 0.35
VPS11Q9H270 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.21■□□□□ 0.35
VPS11Q9H270 AL671277.2-201ENST00000458060 996 ntBASIC17.21■□□□□ 0.35
VPS11Q9H270 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.21■□□□□ 0.35
VPS11Q9H270 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.21■□□□□ 0.35
VPS11Q9H270 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.21■□□□□ 0.35
VPS11Q9H270 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.21■□□□□ 0.35
VPS11Q9H270 IGHV3-41-201ENST00000613121 348 ntBASIC17.21■□□□□ 0.35
VPS11Q9H270 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.21■□□□□ 0.35
VPS11Q9H270 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.21■□□□□ 0.35
VPS11Q9H270 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS11Q9H270 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS11Q9H270 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS11Q9H270 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.21■□□□□ 0.35
VPS11Q9H270 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.21■□□□□ 0.35
VPS11Q9H270 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS11Q9H270 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.21■□□□□ 0.35
VPS11Q9H270 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS11Q9H270 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS11Q9H270 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
VPS11Q9H270 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
VPS11Q9H270 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
VPS11Q9H270 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
VPS11Q9H270 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
VPS11Q9H270 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
VPS11Q9H270 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 AC007950.2-201ENST00000615045 2347 ntBASIC17.2■□□□□ 0.34
VPS11Q9H270 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.2■□□□□ 0.34
VPS11Q9H270 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
VPS11Q9H270 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
VPS11Q9H270 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
VPS11Q9H270 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
VPS11Q9H270 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.2■□□□□ 0.34
VPS11Q9H270 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 FAM220CP-201ENST00000395253 831 ntBASIC17.2■□□□□ 0.34
VPS11Q9H270 AC103564.2-201ENST00000432853 1299 ntBASIC17.2■□□□□ 0.34
VPS11Q9H270 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
VPS11Q9H270 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.2■□□□□ 0.34
VPS11Q9H270 AC063952.2-201ENST00000498792 1227 ntBASIC17.2■□□□□ 0.34
VPS11Q9H270 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VPS11Q9H270 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.2■□□□□ 0.34
VPS11Q9H270 AC011840.4-201ENST00000578471 627 ntBASIC17.2■□□□□ 0.34
VPS11Q9H270 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.2■□□□□ 0.34
VPS11Q9H270 AC005336.2-201ENST00000593183 939 ntBASIC17.2■□□□□ 0.34
VPS11Q9H270 AL138831.2-201ENST00000606564 490 ntBASIC17.2■□□□□ 0.34
VPS11Q9H270 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.2■□□□□ 0.34
VPS11Q9H270 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.2■□□□□ 0.34
VPS11Q9H270 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms