Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FGD4Q96M96 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
FGD4Q96M96 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
FGD4Q96M96 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FGD4Q96M96 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FGD4Q96M96 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.25■□□□□ 0.67
FGD4Q96M96 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.25■□□□□ 0.67
FGD4Q96M96 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.25■□□□□ 0.67
FGD4Q96M96 RN7SL589P-201ENST00000481268 310 ntBASIC19.25■□□□□ 0.67
FGD4Q96M96 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.25■□□□□ 0.67
FGD4Q96M96 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.25■□□□□ 0.67
FGD4Q96M96 AC051619.7-201ENST00000568314 623 ntBASIC19.25■□□□□ 0.67
FGD4Q96M96 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.25■□□□□ 0.67
FGD4Q96M96 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
FGD4Q96M96 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
FGD4Q96M96 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.25■□□□□ 0.67
FGD4Q96M96 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.25■□□□□ 0.67
FGD4Q96M96 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.25■□□□□ 0.67
FGD4Q96M96 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.25■□□□□ 0.67
FGD4Q96M96 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
FGD4Q96M96 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
FGD4Q96M96 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.24■□□□□ 0.67
FGD4Q96M96 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
FGD4Q96M96 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.24■□□□□ 0.67
FGD4Q96M96 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.24■□□□□ 0.67
FGD4Q96M96 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.24■□□□□ 0.67
FGD4Q96M96 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.24■□□□□ 0.67
FGD4Q96M96 AL512356.2-201ENST00000546955 174 ntBASIC19.24■□□□□ 0.67
FGD4Q96M96 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.24■□□□□ 0.67
FGD4Q96M96 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.24■□□□□ 0.67
FGD4Q96M96 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 AC012569.1-201ENST00000591191 1524 ntBASIC19.24■□□□□ 0.67
FGD4Q96M96 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.24■□□□□ 0.67
FGD4Q96M96 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FGD4Q96M96 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
FGD4Q96M96 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.24■□□□□ 0.67
FGD4Q96M96 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
FGD4Q96M96 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 EGFEM1P-202ENST00000431685 1563 ntBASIC19.23■□□□□ 0.67
FGD4Q96M96 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
FGD4Q96M96 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.23■□□□□ 0.67
FGD4Q96M96 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.23■□□□□ 0.67
FGD4Q96M96 AC092474.2-201ENST00000424288 719 ntBASIC19.23■□□□□ 0.67
FGD4Q96M96 FAM86GP-201ENST00000448322 971 ntBASIC19.23■□□□□ 0.67
FGD4Q96M96 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.23■□□□□ 0.67
FGD4Q96M96 AC109635.5-201ENST00000533593 962 ntBASIC19.23■□□□□ 0.67
FGD4Q96M96 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.23■□□□□ 0.67
FGD4Q96M96 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.23■□□□□ 0.67
FGD4Q96M96 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
FGD4Q96M96 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.23■□□□□ 0.67
FGD4Q96M96 AP001059.3-201ENST00000619053 235 ntBASIC19.23■□□□□ 0.67
FGD4Q96M96 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
FGD4Q96M96 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
FGD4Q96M96 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FGD4Q96M96 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.23■□□□□ 0.67
FGD4Q96M96 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FGD4Q96M96 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.22■□□□□ 0.67
FGD4Q96M96 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FGD4Q96M96 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FGD4Q96M96 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FGD4Q96M96 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.22■□□□□ 0.67
FGD4Q96M96 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FGD4Q96M96 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.22■□□□□ 0.67
FGD4Q96M96 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FGD4Q96M96 AC008764.6-201ENST00000595909 2069 ntBASIC19.22■□□□□ 0.67
FGD4Q96M96 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FGD4Q96M96 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms