Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.41■□□□□ 0.7
ERCC4Q92889 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.41■□□□□ 0.7
ERCC4Q92889 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.41■□□□□ 0.7
ERCC4Q92889 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.41■□□□□ 0.7
ERCC4Q92889 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.41■□□□□ 0.7
ERCC4Q92889 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ERCC4Q92889 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.41■□□□□ 0.7
ERCC4Q92889 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ERCC4Q92889 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ERCC4Q92889 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.41■□□□□ 0.7
ERCC4Q92889 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC4Q92889 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.4■□□□□ 0.7
ERCC4Q92889 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 AC132872.4-202ENST00000622924 2756 ntBASIC19.4■□□□□ 0.7
ERCC4Q92889 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.4■□□□□ 0.7
ERCC4Q92889 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ERCC4Q92889 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.4■□□□□ 0.7
ERCC4Q92889 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 FAM220CP-201ENST00000395253 831 ntBASIC19.4■□□□□ 0.7
ERCC4Q92889 AL031133.1-201ENST00000406807 723 ntBASIC19.4■□□□□ 0.7
ERCC4Q92889 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.4■□□□□ 0.7
ERCC4Q92889 KRT8P26-201ENST00000534154 1276 ntBASIC19.4■□□□□ 0.7
ERCC4Q92889 AL136038.3-201ENST00000561909 1096 ntBASIC19.4■□□□□ 0.7
ERCC4Q92889 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.4■□□□□ 0.7
ERCC4Q92889 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.4■□□□□ 0.7
ERCC4Q92889 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.4■□□□□ 0.7
ERCC4Q92889 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
ERCC4Q92889 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ERCC4Q92889 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.4■□□□□ 0.7
ERCC4Q92889 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.4■□□□□ 0.7
ERCC4Q92889 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 AL353593.2-201ENST00000602529 1483 ntBASIC19.4■□□□□ 0.7
ERCC4Q92889 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.4■□□□□ 0.7
ERCC4Q92889 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ERCC4Q92889 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.4■□□□□ 0.7
ERCC4Q92889 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ERCC4Q92889 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.4■□□□□ 0.7
ERCC4Q92889 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.4■□□□□ 0.7
ERCC4Q92889 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
ERCC4Q92889 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
ERCC4Q92889 AC046158.3-201ENST00000624947 2558 ntBASIC19.39■□□□□ 0.7
ERCC4Q92889 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
ERCC4Q92889 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.39■□□□□ 0.7
ERCC4Q92889 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.39■□□□□ 0.7
ERCC4Q92889 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ERCC4Q92889 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERCC4Q92889 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ERCC4Q92889 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERCC4Q92889 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERCC4Q92889 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERCC4Q92889 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.39■□□□□ 0.69
ERCC4Q92889 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERCC4Q92889 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ERCC4Q92889 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.39■□□□□ 0.69
ERCC4Q92889 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.39■□□□□ 0.69
ERCC4Q92889 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
ERCC4Q92889 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.39■□□□□ 0.69
ERCC4Q92889 AC090616.6-201ENST00000582640 721 ntBASIC19.39■□□□□ 0.69
ERCC4Q92889 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
ERCC4Q92889 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.39■□□□□ 0.69
ERCC4Q92889 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ERCC4Q92889 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERCC4Q92889 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ERCC4Q92889 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERCC4Q92889 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERCC4Q92889 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERCC4Q92889 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ERCC4Q92889 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ERCC4Q92889 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ERCC4Q92889 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.39■□□□□ 0.69
ERCC4Q92889 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ERCC4Q92889 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.39■□□□□ 0.69
ERCC4Q92889 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC4Q92889 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.38■□□□□ 0.69
ERCC4Q92889 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ERCC4Q92889 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC4Q92889 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC4Q92889 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC4Q92889 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms