Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AC002310.6-201ENST00000624451 1377 ntBASIC18.34■□□□□ 0.53
SEMA4DQ92854 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SEMA4DQ92854 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SEMA4DQ92854 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SEMA4DQ92854 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA4DQ92854 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.34■□□□□ 0.53
SEMA4DQ92854 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA4DQ92854 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA4DQ92854 AC092910.1-201ENST00000482027 1129 ntBASIC18.34■□□□□ 0.53
SEMA4DQ92854 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.34■□□□□ 0.53
SEMA4DQ92854 AC008667.4-201ENST00000607370 168 ntBASIC18.34■□□□□ 0.53
SEMA4DQ92854 AC116407.3-201ENST00000623905 1129 ntBASIC18.34■□□□□ 0.53
SEMA4DQ92854 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.34■□□□□ 0.53
SEMA4DQ92854 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA4DQ92854 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SEMA4DQ92854 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA4DQ92854 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.34■□□□□ 0.53
SEMA4DQ92854 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.34■□□□□ 0.53
SEMA4DQ92854 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.34■□□□□ 0.53
SEMA4DQ92854 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA4DQ92854 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SEMA4DQ92854 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEMA4DQ92854 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.33■□□□□ 0.53
SEMA4DQ92854 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
SEMA4DQ92854 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SEMA4DQ92854 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEMA4DQ92854 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SEMA4DQ92854 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SEMA4DQ92854 RPS2P28-201ENST00000314255 741 ntBASIC18.33■□□□□ 0.52
SEMA4DQ92854 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.33■□□□□ 0.52
SEMA4DQ92854 IGHV3-65-201ENST00000523210 341 ntBASIC18.33■□□□□ 0.52
SEMA4DQ92854 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SEMA4DQ92854 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.33■□□□□ 0.52
SEMA4DQ92854 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.33■□□□□ 0.52
SEMA4DQ92854 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.33■□□□□ 0.52
SEMA4DQ92854 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.33■□□□□ 0.52
SEMA4DQ92854 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.33■□□□□ 0.52
SEMA4DQ92854 AF228730.7-201ENST00000641842 219 ntBASIC18.33■□□□□ 0.52
SEMA4DQ92854 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.33■□□□□ 0.52
SEMA4DQ92854 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SEMA4DQ92854 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.33■□□□□ 0.52
SEMA4DQ92854 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SEMA4DQ92854 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.33■□□□□ 0.52
SEMA4DQ92854 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.33■□□□□ 0.52
SEMA4DQ92854 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
SEMA4DQ92854 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SEMA4DQ92854 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SEMA4DQ92854 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.33■□□□□ 0.52
SEMA4DQ92854 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.33■□□□□ 0.52
SEMA4DQ92854 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SEMA4DQ92854 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEMA4DQ92854 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEMA4DQ92854 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SEMA4DQ92854 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEMA4DQ92854 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SEMA4DQ92854 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEMA4DQ92854 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SEMA4DQ92854 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEMA4DQ92854 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 AP001005.1-201ENST00000571755 1248 ntBASIC18.32■□□□□ 0.52
SEMA4DQ92854 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 REXO1L3P-201ENST00000622202 1288 ntBASIC18.32■□□□□ 0.52
SEMA4DQ92854 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEMA4DQ92854 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEMA4DQ92854 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEMA4DQ92854 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEMA4DQ92854 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.32■□□□□ 0.52
SEMA4DQ92854 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SEMA4DQ92854 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEMA4DQ92854 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEMA4DQ92854 AC092171.3-201ENST00000610122 2651 ntBASIC18.31■□□□□ 0.52
SEMA4DQ92854 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SEMA4DQ92854 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEMA4DQ92854 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEMA4DQ92854 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEMA4DQ92854 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEMA4DQ92854 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEMA4DQ92854 AC098831.1-202ENST00000438821 336 ntBASIC18.31■□□□□ 0.52
SEMA4DQ92854 FDX1P1-201ENST00000449115 551 ntBASIC18.31■□□□□ 0.52
SEMA4DQ92854 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.31■□□□□ 0.52
SEMA4DQ92854 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEMA4DQ92854 MIR1199-201ENST00000621445 119 ntBASIC18.31■□□□□ 0.52
SEMA4DQ92854 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.31■□□□□ 0.52
SEMA4DQ92854 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEMA4DQ92854 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms