Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SLC44A1Q8WWI5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 AP005901.3-202ENST00000581653 237 ntBASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 AC007950.2-201ENST00000615045 2347 ntBASIC17.13■□□□□ 0.33
SLC44A1Q8WWI5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 NUS1P1-201ENST00000446295 882 ntBASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 AL136038.3-201ENST00000561909 1096 ntBASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SLC44A1Q8WWI5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 LINC00895-201ENST00000629028 1637 ntBASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC44A1Q8WWI5 ACTG1P4-201ENST00000425123 1122 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms