Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC65Q8IXS2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC65Q8IXS2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC65Q8IXS2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 FAM197Y8-203ENST00000450145 560 ntBASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 RNPS1P1-201ENST00000507437 918 ntBASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 OR7E14P-202ENST00000530490 1290 ntBASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 TERC-201ENST00000602385 541 ntBASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 TP73-AS1-207ENST00000624167 988 ntBASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 NKILA-202ENST00000614771 2598 ntBASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC65Q8IXS2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 RPS2P1-201ENST00000434010 821 ntBASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 AL691432.3-201ENST00000621860 400 ntBASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC65Q8IXS2 AL021920.2-201ENST00000624828 1351 ntBASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 ELK2BP-201ENST00000415014 1224 ntBASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 FAAHP1-202ENST00000446499 1238 ntBASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 KRT126P-201ENST00000549467 1181 ntBASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 AC006504.4-201ENST00000592118 1568 ntBASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC65Q8IXS2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms