Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
APLFQ8IW19 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.02■□□□□ 0.32
APLFQ8IW19 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.02■□□□□ 0.32
APLFQ8IW19 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
APLFQ8IW19 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APLFQ8IW19 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
APLFQ8IW19 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.02■□□□□ 0.31
APLFQ8IW19 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
APLFQ8IW19 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
APLFQ8IW19 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
APLFQ8IW19 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
APLFQ8IW19 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
APLFQ8IW19 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
APLFQ8IW19 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.02■□□□□ 0.31
APLFQ8IW19 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.01■□□□□ 0.31
APLFQ8IW19 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.01■□□□□ 0.31
APLFQ8IW19 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.01■□□□□ 0.31
APLFQ8IW19 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.01■□□□□ 0.31
APLFQ8IW19 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
APLFQ8IW19 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.01■□□□□ 0.31
APLFQ8IW19 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.01■□□□□ 0.31
APLFQ8IW19 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.01■□□□□ 0.31
APLFQ8IW19 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.01■□□□□ 0.31
APLFQ8IW19 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
APLFQ8IW19 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.01■□□□□ 0.31
APLFQ8IW19 AP005901.3-202ENST00000581653 237 ntBASIC17.01■□□□□ 0.31
APLFQ8IW19 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
APLFQ8IW19 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.01■□□□□ 0.31
APLFQ8IW19 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.01■□□□□ 0.31
APLFQ8IW19 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.01■□□□□ 0.31
APLFQ8IW19 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
APLFQ8IW19 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
APLFQ8IW19 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
APLFQ8IW19 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
APLFQ8IW19 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
APLFQ8IW19 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.01■□□□□ 0.31
APLFQ8IW19 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.01■□□□□ 0.31
APLFQ8IW19 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.01■□□□□ 0.31
APLFQ8IW19 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APLFQ8IW19 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APLFQ8IW19 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
APLFQ8IW19 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APLFQ8IW19 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
APLFQ8IW19 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
APLFQ8IW19 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APLFQ8IW19 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APLFQ8IW19 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APLFQ8IW19 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
APLFQ8IW19 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
APLFQ8IW19 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
APLFQ8IW19 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17■□□□□ 0.31
APLFQ8IW19 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
APLFQ8IW19 MINOS1P3-201ENST00000457048 203 ntBASIC17■□□□□ 0.31
APLFQ8IW19 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17■□□□□ 0.31
APLFQ8IW19 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
APLFQ8IW19 AF238378.1-201ENST00000526806 358 ntBASIC17■□□□□ 0.31
APLFQ8IW19 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
APLFQ8IW19 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17■□□□□ 0.31
APLFQ8IW19 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17■□□□□ 0.31
APLFQ8IW19 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
APLFQ8IW19 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APLFQ8IW19 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17■□□□□ 0.31
APLFQ8IW19 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17■□□□□ 0.31
APLFQ8IW19 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17■□□□□ 0.31
APLFQ8IW19 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APLFQ8IW19 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
APLFQ8IW19 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APLFQ8IW19 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
APLFQ8IW19 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
APLFQ8IW19 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APLFQ8IW19 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
APLFQ8IW19 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
APLFQ8IW19 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
APLFQ8IW19 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.99■□□□□ 0.31
APLFQ8IW19 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APLFQ8IW19 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms