Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 AC124947.2-201ENST00000547118 1133 ntBASIC17.7■□□□□ 0.42
CCDC25Q86WR0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 AL391005.1-201ENST00000623953 2435 ntBASIC17.7■□□□□ 0.42
CCDC25Q86WR0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC25Q86WR0 AC097374.2-201ENST00000618617 1306 ntBASIC17.7■□□□□ 0.42
CCDC25Q86WR0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 AC010203.1-204ENST00000548782 407 ntBASIC17.69■□□□□ 0.42
CCDC25Q86WR0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 AC011558.1-201ENST00000623459 338 ntBASIC17.69■□□□□ 0.42
CCDC25Q86WR0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC25Q86WR0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 MIR662-201ENST00000384847 95 ntBASIC17.68■□□□□ 0.42
CCDC25Q86WR0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 EGFEM1P-202ENST00000431685 1563 ntBASIC17.68■□□□□ 0.42
CCDC25Q86WR0 AC007967.3-201ENST00000434308 558 ntBASIC17.68■□□□□ 0.42
CCDC25Q86WR0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 AC005332.3-201ENST00000589904 676 ntBASIC17.68■□□□□ 0.42
CCDC25Q86WR0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC25Q86WR0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms