Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 FLJ13224-201ENST00000313737 1514 ntBASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 FOXO1B-201ENST00000504678 1527 ntBASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 KRT17P7-201ENST00000451704 1104 ntBASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 AC105233.2-201ENST00000523697 349 ntBASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 AF228730.5-201ENST00000530288 346 ntBASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 RAB43P1-201ENST00000561790 589 ntBASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 AC073389.1-201ENST00000595595 795 ntBASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 AL139327.4-201ENST00000612362 153 ntBASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 AL354751.1-201ENST00000412768 1863 ntBASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 BX323043.1-201ENST00000641006 1765 ntBASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 RPSAP52-203ENST00000622976 1023 ntBASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
VPS13BQ7Z7G8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 RNA5-8SN1-201ENST00000610460 153 ntBASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 RNA5-8SN5-202ENST00000612463 153 ntBASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 RNA5-8SN4-201ENST00000613359 153 ntBASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 RNA5-8SN5-201ENST00000619471 153 ntBASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 AC012569.1-201ENST00000591191 1524 ntBASIC10.4□□□□□ -0.75
VPS13BQ7Z7G8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 AC084346.2-201ENST00000607097 949 ntBASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 AC007541.1-201ENST00000570282 1469 ntBASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 AC241585.1-201ENST00000433527 519 ntBASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 SLC25A6P5-201ENST00000435663 894 ntBASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
VPS13BQ7Z7G8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms