Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHFQ7M4L6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHFQ7M4L6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHFQ7M4L6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHFQ7M4L6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.5■□□□□ 0.07
SHFQ7M4L6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.5■□□□□ 0.07
SHFQ7M4L6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHFQ7M4L6 GUSBP12-201ENST00000513727 720 ntBASIC15.5■□□□□ 0.07
SHFQ7M4L6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHFQ7M4L6 IGHV3-52-201ENST00000519770 353 ntBASIC15.5■□□□□ 0.07
SHFQ7M4L6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHFQ7M4L6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.5■□□□□ 0.07
SHFQ7M4L6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.5■□□□□ 0.07
SHFQ7M4L6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.5■□□□□ 0.07
SHFQ7M4L6 AC109462.3-201ENST00000573934 613 ntBASIC15.5■□□□□ 0.07
SHFQ7M4L6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.5■□□□□ 0.07
SHFQ7M4L6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.5■□□□□ 0.07
SHFQ7M4L6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHFQ7M4L6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.5■□□□□ 0.07
SHFQ7M4L6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHFQ7M4L6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.5■□□□□ 0.07
SHFQ7M4L6 LINC00554-201ENST00000564841 3011 ntBASIC15.5■□□□□ 0.07
SHFQ7M4L6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.5■□□□□ 0.07
SHFQ7M4L6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHFQ7M4L6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHFQ7M4L6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SHFQ7M4L6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHFQ7M4L6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHFQ7M4L6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SHFQ7M4L6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHFQ7M4L6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.5■□□□□ 0.07
SHFQ7M4L6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.5■□□□□ 0.07
SHFQ7M4L6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.5■□□□□ 0.07
SHFQ7M4L6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.49■□□□□ 0.07
SHFQ7M4L6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 VENTXP5-201ENST00000523979 775 ntBASIC15.49■□□□□ 0.07
SHFQ7M4L6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 AC019129.2-201ENST00000609837 1235 ntBASIC15.49■□□□□ 0.07
SHFQ7M4L6 HYMAI.1-201ENST00000620949 238 ntBASIC15.49■□□□□ 0.07
SHFQ7M4L6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 PAUPAR-201ENST00000630360 2965 ntBASIC15.49■□□□□ 0.07
SHFQ7M4L6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SHFQ7M4L6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHFQ7M4L6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHFQ7M4L6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHFQ7M4L6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHFQ7M4L6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHFQ7M4L6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHFQ7M4L6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 KRT18P57-201ENST00000443599 1254 ntBASIC15.48■□□□□ 0.07
SHFQ7M4L6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHFQ7M4L6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHFQ7M4L6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHFQ7M4L6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHFQ7M4L6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHFQ7M4L6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHFQ7M4L6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHFQ7M4L6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHFQ7M4L6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms