Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
USP45Q70EL2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
USP45Q70EL2 MED15P5-201ENST00000423150 992 ntBASIC17.1■□□□□ 0.33
USP45Q70EL2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
USP45Q70EL2 PMS2P1-201ENST00000431037 1228 ntBASIC17.1■□□□□ 0.33
USP45Q70EL2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.1■□□□□ 0.33
USP45Q70EL2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP45Q70EL2 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.1■□□□□ 0.33
USP45Q70EL2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.1■□□□□ 0.33
USP45Q70EL2 KRT18P58-201ENST00000527480 1120 ntBASIC17.1■□□□□ 0.33
USP45Q70EL2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.1■□□□□ 0.33
USP45Q70EL2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP45Q70EL2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.1■□□□□ 0.33
USP45Q70EL2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.1■□□□□ 0.33
USP45Q70EL2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP45Q70EL2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP45Q70EL2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP45Q70EL2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.1■□□□□ 0.33
USP45Q70EL2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP45Q70EL2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP45Q70EL2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP45Q70EL2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.1■□□□□ 0.33
USP45Q70EL2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP45Q70EL2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
USP45Q70EL2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
USP45Q70EL2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP45Q70EL2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.09■□□□□ 0.33
USP45Q70EL2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.09■□□□□ 0.33
USP45Q70EL2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
USP45Q70EL2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
USP45Q70EL2 AP000347.1-202ENST00000435868 847 ntBASIC17.09■□□□□ 0.33
USP45Q70EL2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
USP45Q70EL2 SLC25A6P2-201ENST00000497974 877 ntBASIC17.09■□□□□ 0.33
USP45Q70EL2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.09■□□□□ 0.33
USP45Q70EL2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.09■□□□□ 0.33
USP45Q70EL2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.09■□□□□ 0.33
USP45Q70EL2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.09■□□□□ 0.33
USP45Q70EL2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.09■□□□□ 0.33
USP45Q70EL2 FAM197Y3-203ENST00000618346 717 ntBASIC17.09■□□□□ 0.33
USP45Q70EL2 AC129492.6-201ENST00000611383 1305 ntBASIC17.09■□□□□ 0.33
USP45Q70EL2 AC002310.6-201ENST00000624451 1377 ntBASIC17.09■□□□□ 0.33
USP45Q70EL2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.09■□□□□ 0.33
USP45Q70EL2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.09■□□□□ 0.33
USP45Q70EL2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.09■□□□□ 0.33
USP45Q70EL2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
USP45Q70EL2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.09■□□□□ 0.33
USP45Q70EL2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
USP45Q70EL2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
USP45Q70EL2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
USP45Q70EL2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP45Q70EL2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
USP45Q70EL2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
USP45Q70EL2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP45Q70EL2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
USP45Q70EL2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP45Q70EL2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP45Q70EL2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.08■□□□□ 0.33
USP45Q70EL2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.08■□□□□ 0.33
USP45Q70EL2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
USP45Q70EL2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP45Q70EL2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
USP45Q70EL2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
USP45Q70EL2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.08■□□□□ 0.32
USP45Q70EL2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP45Q70EL2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.08■□□□□ 0.32
USP45Q70EL2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
USP45Q70EL2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP45Q70EL2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP45Q70EL2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.08■□□□□ 0.32
USP45Q70EL2 AL021920.2-201ENST00000624828 1351 ntBASIC17.08■□□□□ 0.32
USP45Q70EL2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP45Q70EL2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP45Q70EL2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
USP45Q70EL2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.08■□□□□ 0.32
USP45Q70EL2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
USP45Q70EL2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.08■□□□□ 0.32
USP45Q70EL2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.08■□□□□ 0.32
USP45Q70EL2 RNA5SP416-201ENST00000516838 111 ntBASIC17.08■□□□□ 0.32
USP45Q70EL2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.08■□□□□ 0.32
USP45Q70EL2 AC140113.2-201ENST00000604370 208 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms