Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC25.14■■□□□ 1.61
CCDC141Q6ZP82 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CCDC141Q6ZP82 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
CCDC141Q6ZP82 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CCDC141Q6ZP82 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC25.14■■□□□ 1.61
CCDC141Q6ZP82 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC25.14■■□□□ 1.61
CCDC141Q6ZP82 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
CCDC141Q6ZP82 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC25.14■■□□□ 1.61
CCDC141Q6ZP82 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 GATB-213ENST00000515812 1893 ntTSL 5 BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 AC073439.1-201ENST00000624121 1774 ntBASIC25.13■■□□□ 1.61
CCDC141Q6ZP82 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 NOC2LP1-202ENST00000452600 2235 ntBASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 AC003101.2-201ENST00000612557 442 ntBASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC141Q6ZP82 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 PIN1P1-201ENST00000412108 996 ntBASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 RN7SL692P-201ENST00000464677 288 ntBASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 AL662799.1-202ENST00000614205 422 ntBASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC141Q6ZP82 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 AC013467.2-201ENST00000605472 835 ntBASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC141Q6ZP82 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC141Q6ZP82 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC25.09■■□□□ 1.61
CCDC141Q6ZP82 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC141Q6ZP82 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
CCDC141Q6ZP82 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC25.09■■□□□ 1.61
CCDC141Q6ZP82 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC25.09■■□□□ 1.61
CCDC141Q6ZP82 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC25.09■■□□□ 1.61
CCDC141Q6ZP82 MPI-209ENST00000564003 1195 ntTSL 2 BASIC25.09■■□□□ 1.61
CCDC141Q6ZP82 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms