Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC62Q6P9F0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC62Q6P9F0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.14■□□□□ 0.66
CCDC62Q6P9F0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC62Q6P9F0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 AL671277.1-201ENST00000429656 993 ntBASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 KRT8P48-201ENST00000515599 1220 ntBASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 AC026120.1-201ENST00000611536 926 ntBASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC62Q6P9F0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 AC109322.1-201ENST00000524499 1264 ntBASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 AC005412.3-201ENST00000580309 715 ntBASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 LINC02084-201ENST00000606069 1096 ntBASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 AC106028.4-201ENST00000614509 607 ntBASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC62Q6P9F0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 PCDHB18P-201ENST00000524813 2368 ntBASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 AC023141.5-201ENST00000458585 616 ntBASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 FAM86C2P-203ENST00000528684 1004 ntBASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 NOC2LP1-202ENST00000452600 2235 ntBASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC62Q6P9F0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms