Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 AL512638.1-201ENST00000457493 794 ntBASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
CDC42BPAQ5VT25 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC25.45■■□□□ 1.67
CDC42BPAQ5VT25 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.67
CDC42BPAQ5VT25 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CDC42BPAQ5VT25 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 AC104794.3-201ENST00000566840 1248 ntBASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 AL358472.5-202ENST00000641448 1267 ntBASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 SNX33P1-201ENST00000592116 1762 ntBASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CDC42BPAQ5VT25 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 AL353705.2-201ENST00000428243 662 ntBASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 U91328.1-201ENST00000437528 223 ntBASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 API5-211ENST00000534695 560 ntTSL 5 BASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 CDK4-206ENST00000549606 558 ntTSL 2 BASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 RAB34-223ENST00000636154 730 ntTSL 2 BASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 CETN4P-206ENST00000642099 2168 ntBASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC25.44■■□□□ 1.66
CDC42BPAQ5VT25 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC25.43■■□□□ 1.66
CDC42BPAQ5VT25 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CDC42BPAQ5VT25 GNE-204ENST00000539208 2190 ntTSL 2 BASIC25.43■■□□□ 1.66
CDC42BPAQ5VT25 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CDC42BPAQ5VT25 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CDC42BPAQ5VT25 NOP2-220ENST00000545915 630 ntTSL 2 BASIC25.43■■□□□ 1.66
CDC42BPAQ5VT25 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC25.43■■□□□ 1.66
CDC42BPAQ5VT25 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC25.43■■□□□ 1.66
CDC42BPAQ5VT25 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CDC42BPAQ5VT25 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
CDC42BPAQ5VT25 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
CDC42BPAQ5VT25 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CDC42BPAQ5VT25 SPDYE18-201ENST00000510091 1050 ntBASIC25.43■■□□□ 1.66
CDC42BPAQ5VT25 AL512361.1-201ENST00000554200 418 ntBASIC25.43■■□□□ 1.66
CDC42BPAQ5VT25 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CDC42BPAQ5VT25 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 CU639417.3-201ENST00000624240 1404 ntBASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 GK-202ENST00000378941 458 ntTSL 3 BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 CENPM-206ENST00000407253 818 ntTSL 2 BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 RPL37AP1-201ENST00000412502 279 ntBASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 CR383656.12-201ENST00000549567 513 ntBASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 AC009407.1-201ENST00000568958 598 ntBASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 ARL16-202ENST00000570561 768 ntTSL 2 BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CDC42BPAQ5VT25 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 GOLGA2P9-201ENST00000596977 1937 ntBASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 RNA5SP410-201ENST00000516285 106 ntBASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms