Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 AC008764.6-201ENST00000595909 2069 ntBASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 AL353779.1-201ENST00000434793 351 ntBASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13DQ5THJ4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 MIR4259-201ENST00000584466 101 ntBASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 Six3os1_5.1-201ENST00000611000 271 ntBASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 AL358472.5-202ENST00000641448 1267 ntBASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 CETN4P-206ENST00000642099 2168 ntBASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 CTBP2P3-201ENST00000585629 1255 ntBASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 FAM220BP-201ENST00000377689 816 ntBASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 AC091167.2-201ENST00000579581 588 ntBASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC11.3□□□□□ -0.6
VPS13DQ5THJ4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 AC008738.7-201ENST00000609744 511 ntBASIC11.29□□□□□ -0.6
VPS13DQ5THJ4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms