Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARS2Q5ST30 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.02■□□□□ 0.48
VARS2Q5ST30 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARS2Q5ST30 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARS2Q5ST30 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARS2Q5ST30 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.02■□□□□ 0.48
VARS2Q5ST30 TSEN15P1-201ENST00000423257 515 ntBASIC18.02■□□□□ 0.48
VARS2Q5ST30 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VARS2Q5ST30 AL671277.1-201ENST00000429656 993 ntBASIC18.02■□□□□ 0.48
VARS2Q5ST30 TIMM8BP1-201ENST00000452384 211 ntBASIC18.02■□□□□ 0.48
VARS2Q5ST30 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.02■□□□□ 0.48
VARS2Q5ST30 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.02■□□□□ 0.48
VARS2Q5ST30 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VARS2Q5ST30 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.02■□□□□ 0.48
VARS2Q5ST30 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.02■□□□□ 0.48
VARS2Q5ST30 AP000240.1-201ENST00000609910 452 ntBASIC18.02■□□□□ 0.48
VARS2Q5ST30 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
VARS2Q5ST30 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARS2Q5ST30 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
VARS2Q5ST30 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
VARS2Q5ST30 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.02■□□□□ 0.47
VARS2Q5ST30 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.02■□□□□ 0.47
VARS2Q5ST30 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.02■□□□□ 0.47
VARS2Q5ST30 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
VARS2Q5ST30 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
VARS2Q5ST30 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.02■□□□□ 0.47
VARS2Q5ST30 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 AL139400.1-201ENST00000366220 510 ntBASIC18.01■□□□□ 0.47
VARS2Q5ST30 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 AC026120.1-201ENST00000611536 926 ntBASIC18.01■□□□□ 0.47
VARS2Q5ST30 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
VARS2Q5ST30 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARS2Q5ST30 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18■□□□□ 0.47
VARS2Q5ST30 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VARS2Q5ST30 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VARS2Q5ST30 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18■□□□□ 0.47
VARS2Q5ST30 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VARS2Q5ST30 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
VARS2Q5ST30 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18■□□□□ 0.47
VARS2Q5ST30 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18■□□□□ 0.47
VARS2Q5ST30 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VARS2Q5ST30 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VARS2Q5ST30 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VARS2Q5ST30 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18■□□□□ 0.47
VARS2Q5ST30 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18■□□□□ 0.47
VARS2Q5ST30 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18■□□□□ 0.47
VARS2Q5ST30 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18■□□□□ 0.47
VARS2Q5ST30 GATB-205ENST00000508611 605 ntTSL 2 BASIC18■□□□□ 0.47
VARS2Q5ST30 FAM86C2P-203ENST00000528684 1004 ntBASIC18■□□□□ 0.47
VARS2Q5ST30 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18■□□□□ 0.47
VARS2Q5ST30 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18■□□□□ 0.47
VARS2Q5ST30 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
VARS2Q5ST30 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18■□□□□ 0.47
VARS2Q5ST30 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
VARS2Q5ST30 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
VARS2Q5ST30 TOP3BP1-201ENST00000420768 1380 ntBASIC18■□□□□ 0.47
VARS2Q5ST30 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18■□□□□ 0.47
VARS2Q5ST30 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18■□□□□ 0.47
VARS2Q5ST30 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18■□□□□ 0.47
VARS2Q5ST30 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18■□□□□ 0.47
VARS2Q5ST30 AC138932.1-201ENST00000534164 6830 ntBASIC18■□□□□ 0.47
VARS2Q5ST30 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18■□□□□ 0.47
VARS2Q5ST30 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
VARS2Q5ST30 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18■□□□□ 0.47
VARS2Q5ST30 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18■□□□□ 0.47
VARS2Q5ST30 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VARS2Q5ST30 AC068880.1-201ENST00000507289 2297 ntBASIC18■□□□□ 0.47
VARS2Q5ST30 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARS2Q5ST30 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
VARS2Q5ST30 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms