Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GABPAQ06546 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GABPAQ06546 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GABPAQ06546 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.91■□□□□ 0.78
GABPAQ06546 TIMM8BP1-201ENST00000452384 211 ntBASIC19.91■□□□□ 0.78
GABPAQ06546 AC023141.5-201ENST00000458585 616 ntBASIC19.91■□□□□ 0.78
GABPAQ06546 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.91■□□□□ 0.78
GABPAQ06546 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
GABPAQ06546 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
GABPAQ06546 MIR3909-201ENST00000579518 119 ntBASIC19.91■□□□□ 0.78
GABPAQ06546 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.91■□□□□ 0.78
GABPAQ06546 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.91■□□□□ 0.78
GABPAQ06546 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
GABPAQ06546 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GABPAQ06546 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.91■□□□□ 0.78
GABPAQ06546 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.91■□□□□ 0.78
GABPAQ06546 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.91■□□□□ 0.78
GABPAQ06546 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
GABPAQ06546 AC131009.4-201ENST00000624048 1740 ntBASIC19.9■□□□□ 0.78
GABPAQ06546 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
GABPAQ06546 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.9■□□□□ 0.78
GABPAQ06546 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
GABPAQ06546 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
GABPAQ06546 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.9■□□□□ 0.78
GABPAQ06546 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 AL627223.1-201ENST00000416693 442 ntBASIC19.9■□□□□ 0.78
GABPAQ06546 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 AL645939.2-201ENST00000427340 991 ntBASIC19.9■□□□□ 0.78
GABPAQ06546 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.9■□□□□ 0.78
GABPAQ06546 CYMP-203ENST00000474680 1263 ntBASIC19.9■□□□□ 0.78
GABPAQ06546 AC079140.1-201ENST00000508039 487 ntBASIC19.9■□□□□ 0.78
GABPAQ06546 AC087641.1-201ENST00000557561 1021 ntBASIC19.9■□□□□ 0.78
GABPAQ06546 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.9■□□□□ 0.78
GABPAQ06546 AL135744.1-201ENST00000565098 629 ntBASIC19.9■□□□□ 0.78
GABPAQ06546 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.9■□□□□ 0.78
GABPAQ06546 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.9■□□□□ 0.78
GABPAQ06546 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 AC093028.1-201ENST00000622998 982 ntBASIC19.9■□□□□ 0.78
GABPAQ06546 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
GABPAQ06546 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.9■□□□□ 0.78
GABPAQ06546 AC092053.1-201ENST00000605787 1936 ntBASIC19.9■□□□□ 0.78
GABPAQ06546 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.9■□□□□ 0.78
GABPAQ06546 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
GABPAQ06546 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
GABPAQ06546 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GABPAQ06546 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.9■□□□□ 0.78
GABPAQ06546 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.9■□□□□ 0.78
GABPAQ06546 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
GABPAQ06546 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
GABPAQ06546 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
GABPAQ06546 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABPAQ06546 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABPAQ06546 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABPAQ06546 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABPAQ06546 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
GABPAQ06546 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABPAQ06546 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
GABPAQ06546 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABPAQ06546 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABPAQ06546 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
GABPAQ06546 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GABPAQ06546 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABPAQ06546 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABPAQ06546 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABPAQ06546 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
GABPAQ06546 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GABPAQ06546 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.89■□□□□ 0.77
GABPAQ06546 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.89■□□□□ 0.77
GABPAQ06546 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.89■□□□□ 0.77
GABPAQ06546 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GABPAQ06546 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
GABPAQ06546 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.89■□□□□ 0.77
GABPAQ06546 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.89■□□□□ 0.77
GABPAQ06546 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.89■□□□□ 0.77
GABPAQ06546 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.89■□□□□ 0.77
GABPAQ06546 LINC01225-203ENST00000563550 1244 ntBASIC19.89■□□□□ 0.77
GABPAQ06546 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABPAQ06546 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GABPAQ06546 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.89■□□□□ 0.77
GABPAQ06546 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.89■□□□□ 0.77
GABPAQ06546 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms