Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
HERVK_113P62684 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HERVK_113P62684 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HERVK_113P62684 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HERVK_113P62684 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HERVK_113P62684 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERVK_113P62684 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERVK_113P62684 AC012317.2-201ENST00000623305 2251 ntBASIC19.73■□□□□ 0.75
HERVK_113P62684 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HERVK_113P62684 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERVK_113P62684 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.73■□□□□ 0.75
HERVK_113P62684 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HERVK_113P62684 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.73■□□□□ 0.75
HERVK_113P62684 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERVK_113P62684 AL592309.1-201ENST00000443127 649 ntBASIC19.73■□□□□ 0.75
HERVK_113P62684 AC079140.1-201ENST00000508039 487 ntBASIC19.73■□□□□ 0.75
HERVK_113P62684 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.73■□□□□ 0.75
HERVK_113P62684 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HERVK_113P62684 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HERVK_113P62684 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERVK_113P62684 LINC01451-201ENST00000623792 534 ntBASIC19.73■□□□□ 0.75
HERVK_113P62684 PP12613-201ENST00000424958 2230 ntBASIC19.73■□□□□ 0.75
HERVK_113P62684 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HERVK_113P62684 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERVK_113P62684 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HERVK_113P62684 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HERVK_113P62684 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERVK_113P62684 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HERVK_113P62684 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.73■□□□□ 0.75
HERVK_113P62684 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERVK_113P62684 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERVK_113P62684 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERVK_113P62684 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.72■□□□□ 0.75
HERVK_113P62684 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
HERVK_113P62684 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERVK_113P62684 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HERVK_113P62684 TFAMP1-201ENST00000412727 736 ntBASIC19.72■□□□□ 0.75
HERVK_113P62684 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HERVK_113P62684 AC092474.2-201ENST00000424288 719 ntBASIC19.72■□□□□ 0.75
HERVK_113P62684 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HERVK_113P62684 RN7SL589P-201ENST00000481268 310 ntBASIC19.72■□□□□ 0.75
HERVK_113P62684 AC067863.1-201ENST00000494933 530 ntBASIC19.72■□□□□ 0.75
HERVK_113P62684 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HERVK_113P62684 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.72■□□□□ 0.75
HERVK_113P62684 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.72■□□□□ 0.75
HERVK_113P62684 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HERVK_113P62684 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.72■□□□□ 0.75
HERVK_113P62684 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.72■□□□□ 0.75
HERVK_113P62684 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.72■□□□□ 0.75
HERVK_113P62684 DUX4L27-201ENST00000554796 1261 ntBASIC19.72■□□□□ 0.75
HERVK_113P62684 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.72■□□□□ 0.75
HERVK_113P62684 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.72■□□□□ 0.75
HERVK_113P62684 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.72■□□□□ 0.75
HERVK_113P62684 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERVK_113P62684 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HERVK_113P62684 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERVK_113P62684 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.72■□□□□ 0.75
HERVK_113P62684 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERVK_113P62684 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERVK_113P62684 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERVK_113P62684 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.72■□□□□ 0.75
HERVK_113P62684 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HERVK_113P62684 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.71■□□□□ 0.75
HERVK_113P62684 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.71■□□□□ 0.75
HERVK_113P62684 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.71■□□□□ 0.75
HERVK_113P62684 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HERVK_113P62684 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERVK_113P62684 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.71■□□□□ 0.75
HERVK_113P62684 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERVK_113P62684 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HERVK_113P62684 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERVK_113P62684 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HERVK_113P62684 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.71■□□□□ 0.75
HERVK_113P62684 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.71■□□□□ 0.75
HERVK_113P62684 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.71■□□□□ 0.75
HERVK_113P62684 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.71■□□□□ 0.75
HERVK_113P62684 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.71■□□□□ 0.75
HERVK_113P62684 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.71■□□□□ 0.75
HERVK_113P62684 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.71■□□□□ 0.75
HERVK_113P62684 AC243562.1-201ENST00000560672 389 ntBASIC19.71■□□□□ 0.75
HERVK_113P62684 MIR4745-201ENST00000577608 62 ntBASIC19.71■□□□□ 0.75
HERVK_113P62684 MIR4515-201ENST00000584082 81 ntBASIC19.71■□□□□ 0.75
HERVK_113P62684 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERVK_113P62684 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
HERVK_113P62684 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERVK_113P62684 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HERVK_113P62684 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.71■□□□□ 0.75
HERVK_113P62684 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
HERVK_113P62684 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HERVK_113P62684 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HERVK_113P62684 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERVK_113P62684 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
HERVK_113P62684 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HERVK_113P62684 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.71■□□□□ 0.75
HERVK_113P62684 AC080080.1-201ENST00000625121 2420 ntBASIC19.71■□□□□ 0.75
HERVK_113P62684 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HERVK_113P62684 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERVK_113P62684 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
HERVK_113P62684 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
HERVK_113P62684 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms