Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MIR4515-201ENST00000584082 81 ntBASIC16.81■□□□□ 0.28
CLDN2P57739 AC022145.2-201ENST00000598203 171 ntBASIC16.81■□□□□ 0.28
CLDN2P57739 AC004835.2-201ENST00000603762 682 ntBASIC16.81■□□□□ 0.28
CLDN2P57739 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN2P57739 AC106028.4-201ENST00000614509 607 ntBASIC16.81■□□□□ 0.28
CLDN2P57739 AC093028.1-201ENST00000622998 982 ntBASIC16.81■□□□□ 0.28
CLDN2P57739 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN2P57739 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN2P57739 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN2P57739 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLDN2P57739 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN2P57739 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN2P57739 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN2P57739 LETM1P2-201ENST00000597330 2178 ntBASIC16.81■□□□□ 0.28
CLDN2P57739 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLDN2P57739 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN2P57739 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
CLDN2P57739 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN2P57739 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 GNAS-203ENST00000306120 1878 ntBASIC16.8■□□□□ 0.28
CLDN2P57739 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDN2P57739 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CLDN2P57739 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN2P57739 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN2P57739 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN2P57739 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN2P57739 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 HMGA1P7-201ENST00000406908 502 ntBASIC16.8■□□□□ 0.28
CLDN2P57739 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN2P57739 TSEN15P1-201ENST00000423257 515 ntBASIC16.8■□□□□ 0.28
CLDN2P57739 AC140658.5-201ENST00000438532 169 ntBASIC16.8■□□□□ 0.28
CLDN2P57739 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLDN2P57739 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN2P57739 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN2P57739 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.8■□□□□ 0.28
CLDN2P57739 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN2P57739 AC099522.2-201ENST00000607001 744 ntBASIC16.8■□□□□ 0.28
CLDN2P57739 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLDN2P57739 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
CLDN2P57739 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CLDN2P57739 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN2P57739 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN2P57739 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CLDN2P57739 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN2P57739 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
CLDN2P57739 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN2P57739 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLDN2P57739 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.79■□□□□ 0.28
CLDN2P57739 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN2P57739 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN2P57739 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN2P57739 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN2P57739 AL121761.2-201ENST00000598007 1648 ntBASIC16.79■□□□□ 0.28
CLDN2P57739 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLDN2P57739 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CLDN2P57739 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN2P57739 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CLDN2P57739 AL645939.2-201ENST00000427340 991 ntBASIC16.79■□□□□ 0.28
CLDN2P57739 AL671277.1-201ENST00000429656 993 ntBASIC16.79■□□□□ 0.28
CLDN2P57739 ADH5P3-201ENST00000433842 1137 ntBASIC16.79■□□□□ 0.28
CLDN2P57739 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN2P57739 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN2P57739 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.79■□□□□ 0.28
CLDN2P57739 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN2P57739 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.79■□□□□ 0.28
CLDN2P57739 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.79■□□□□ 0.28
CLDN2P57739 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLDN2P57739 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN2P57739 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN2P57739 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN2P57739 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CLDN2P57739 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN2P57739 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN2P57739 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN2P57739 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN2P57739 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN2P57739 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLDN2P57739 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CLDN2P57739 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN2P57739 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN2P57739 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN2P57739 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN2P57739 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLDN2P57739 AC016396.2-201ENST00000562575 1417 ntBASIC16.79■□□□□ 0.28
CLDN2P57739 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms