Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 KRT18P27-201ENST00000427733 1299 ntBASIC17.26■□□□□ 0.35
WNT3AP56704 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 AF186996.4-201ENST00000467186 377 ntBASIC17.26■□□□□ 0.35
WNT3AP56704 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.26■□□□□ 0.35
WNT3AP56704 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.26■□□□□ 0.35
WNT3AP56704 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.26■□□□□ 0.35
WNT3AP56704 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.26■□□□□ 0.35
WNT3AP56704 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.26■□□□□ 0.35
WNT3AP56704 AC148477.8-201ENST00000624298 468 ntBASIC17.26■□□□□ 0.35
WNT3AP56704 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.26■□□□□ 0.35
WNT3AP56704 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.26■□□□□ 0.35
WNT3AP56704 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.26■□□□□ 0.35
WNT3AP56704 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.26■□□□□ 0.35
WNT3AP56704 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.26■□□□□ 0.35
WNT3AP56704 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
WNT3AP56704 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
WNT3AP56704 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.26■□□□□ 0.35
WNT3AP56704 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
WNT3AP56704 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.25■□□□□ 0.35
WNT3AP56704 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
WNT3AP56704 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3AP56704 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3AP56704 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
WNT3AP56704 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3AP56704 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
WNT3AP56704 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3AP56704 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3AP56704 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3AP56704 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.25■□□□□ 0.35
WNT3AP56704 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.25■□□□□ 0.35
WNT3AP56704 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3AP56704 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.25■□□□□ 0.35
WNT3AP56704 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.25■□□□□ 0.35
WNT3AP56704 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.25■□□□□ 0.35
WNT3AP56704 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.25■□□□□ 0.35
WNT3AP56704 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.25■□□□□ 0.35
WNT3AP56704 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.25■□□□□ 0.35
WNT3AP56704 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.25■□□□□ 0.35
WNT3AP56704 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.25■□□□□ 0.35
WNT3AP56704 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.25■□□□□ 0.35
WNT3AP56704 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.25■□□□□ 0.35
WNT3AP56704 AC104692.2-201ENST00000603054 253 ntBASIC17.25■□□□□ 0.35
WNT3AP56704 AL805961.1-202ENST00000641562 540 ntBASIC17.25■□□□□ 0.35
WNT3AP56704 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.25■□□□□ 0.35
WNT3AP56704 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
WNT3AP56704 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
WNT3AP56704 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.25■□□□□ 0.35
WNT3AP56704 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
WNT3AP56704 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
WNT3AP56704 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.25■□□□□ 0.35
WNT3AP56704 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3AP56704 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.24■□□□□ 0.35
WNT3AP56704 TUBB8P12-201ENST00000308911 1335 ntBASIC17.24■□□□□ 0.35
WNT3AP56704 TUBB7P-202ENST00000428444 1305 ntBASIC17.24■□□□□ 0.35
WNT3AP56704 TUBB8P7-204ENST00000567960 1332 ntBASIC17.24■□□□□ 0.35
WNT3AP56704 PCDHB17P-201ENST00000539533 2393 ntBASIC17.24■□□□□ 0.35
WNT3AP56704 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.24■□□□□ 0.35
WNT3AP56704 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
WNT3AP56704 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.24■□□□□ 0.35
WNT3AP56704 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.24■□□□□ 0.35
WNT3AP56704 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.24■□□□□ 0.35
WNT3AP56704 PAWRP1-201ENST00000451083 565 ntBASIC17.24■□□□□ 0.35
WNT3AP56704 AP002469.2-201ENST00000531724 424 ntBASIC17.24■□□□□ 0.35
WNT3AP56704 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.24■□□□□ 0.35
WNT3AP56704 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.24■□□□□ 0.35
WNT3AP56704 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.24■□□□□ 0.35
WNT3AP56704 AC008735.5-201ENST00000623544 497 ntBASIC17.24■□□□□ 0.35
WNT3AP56704 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.24■□□□□ 0.35
WNT3AP56704 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.24■□□□□ 0.35
WNT3AP56704 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
WNT3AP56704 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
WNT3AP56704 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
WNT3AP56704 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3AP56704 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3AP56704 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.23■□□□□ 0.35
WNT3AP56704 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms