Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.3■□□□□ 0.04
CAV3P56539 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
CAV3P56539 AC092647.4-201ENST00000457211 535 ntBASIC15.3■□□□□ 0.04
CAV3P56539 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 DUX4L26-201ENST00000489078 1255 ntBASIC15.3■□□□□ 0.04
CAV3P56539 AC063952.2-201ENST00000498792 1227 ntBASIC15.3■□□□□ 0.04
CAV3P56539 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.3■□□□□ 0.04
CAV3P56539 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.3■□□□□ 0.04
CAV3P56539 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.3■□□□□ 0.04
CAV3P56539 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.3■□□□□ 0.04
CAV3P56539 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 DBET-201ENST00000630918 3363 ntBASIC15.3■□□□□ 0.04
CAV3P56539 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.3■□□□□ 0.04
CAV3P56539 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CAV3P56539 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAV3P56539 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CAV3P56539 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CAV3P56539 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.3■□□□□ 0.04
CAV3P56539 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.3■□□□□ 0.04
CAV3P56539 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.29■□□□□ 0.04
CAV3P56539 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.29■□□□□ 0.04
CAV3P56539 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.29■□□□□ 0.04
CAV3P56539 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CAV3P56539 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CAV3P56539 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.29■□□□□ 0.04
CAV3P56539 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CAV3P56539 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CAV3P56539 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CAV3P56539 RASA4DP-201ENST00000460726 1199 ntBASIC15.29■□□□□ 0.04
CAV3P56539 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.29■□□□□ 0.04
CAV3P56539 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.29■□□□□ 0.04
CAV3P56539 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.29■□□□□ 0.04
CAV3P56539 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CAV3P56539 AC023824.1-201ENST00000562945 2975 ntBASIC15.29■□□□□ 0.04
CAV3P56539 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAV3P56539 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.29■□□□□ 0.04
CAV3P56539 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CAV3P56539 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.28■□□□□ 0.04
CAV3P56539 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CAV3P56539 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CAV3P56539 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.28■□□□□ 0.04
CAV3P56539 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.28■□□□□ 0.04
CAV3P56539 FAM8A6P-201ENST00000407496 1135 ntBASIC15.28■□□□□ 0.04
CAV3P56539 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 AC005104.2-201ENST00000427818 678 ntBASIC15.28■□□□□ 0.04
CAV3P56539 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.28■□□□□ 0.04
CAV3P56539 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.28■□□□□ 0.04
CAV3P56539 AC022616.7-201ENST00000525383 220 ntBASIC15.28■□□□□ 0.04
CAV3P56539 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.28■□□□□ 0.04
CAV3P56539 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.28■□□□□ 0.04
CAV3P56539 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.28■□□□□ 0.04
CAV3P56539 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.28■□□□□ 0.04
CAV3P56539 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAV3P56539 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms