Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDH4P55283 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDH4P55283 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH4P55283 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CDH4P55283 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDH4P55283 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CDH4P55283 FZD10-202ENST00000539839 3282 ntBASIC17.41■□□□□ 0.38
CDH4P55283 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH4P55283 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDH4P55283 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH4P55283 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 KRT8P49-201ENST00000604166 1432 ntBASIC17.41■□□□□ 0.38
CDH4P55283 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH4P55283 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CDH4P55283 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CDH4P55283 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH4P55283 AL513480.1-201ENST00000451731 511 ntBASIC17.41■□□□□ 0.38
CDH4P55283 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH4P55283 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH4P55283 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH4P55283 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDH4P55283 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CDH4P55283 AC002347.1-201ENST00000569543 541 ntBASIC17.41■□□□□ 0.38
CDH4P55283 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH4P55283 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 AC004877.2-201ENST00000623941 599 ntBASIC17.41■□□□□ 0.38
CDH4P55283 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 TUBB8P12-201ENST00000308911 1335 ntBASIC17.41■□□□□ 0.38
CDH4P55283 TUBB7P-202ENST00000428444 1305 ntBASIC17.41■□□□□ 0.38
CDH4P55283 BCAR1-209ENST00000546196 1340 ntBASIC17.41■□□□□ 0.38
CDH4P55283 TUBB8P7-204ENST00000567960 1332 ntBASIC17.41■□□□□ 0.38
CDH4P55283 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDH4P55283 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH4P55283 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH4P55283 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH4P55283 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH4P55283 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDH4P55283 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH4P55283 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH4P55283 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH4P55283 AC023274.1-201ENST00000418278 595 ntBASIC17.4■□□□□ 0.38
CDH4P55283 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH4P55283 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH4P55283 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH4P55283 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH4P55283 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH4P55283 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.4■□□□□ 0.38
CDH4P55283 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CDH4P55283 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH4P55283 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH4P55283 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDH4P55283 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDH4P55283 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH4P55283 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH4P55283 AL353732.1-201ENST00000569618 1459 ntBASIC17.39■□□□□ 0.37
CDH4P55283 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH4P55283 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDH4P55283 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH4P55283 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH4P55283 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH4P55283 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH4P55283 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDH4P55283 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH4P55283 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.39■□□□□ 0.37
CDH4P55283 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH4P55283 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDH4P55283 AC004832.2-201ENST00000426397 482 ntBASIC17.39■□□□□ 0.37
CDH4P55283 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDH4P55283 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH4P55283 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms