Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EPHB3P54753 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
EPHB3P54753 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
EPHB3P54753 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
EPHB3P54753 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.77■□□□□ 0.43
EPHB3P54753 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.77■□□□□ 0.43
EPHB3P54753 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
EPHB3P54753 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
EPHB3P54753 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.77■□□□□ 0.43
EPHB3P54753 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
EPHB3P54753 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB3P54753 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
EPHB3P54753 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB3P54753 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.76■□□□□ 0.43
EPHB3P54753 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB3P54753 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB3P54753 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.76■□□□□ 0.43
EPHB3P54753 AL627223.1-201ENST00000416693 442 ntBASIC17.76■□□□□ 0.43
EPHB3P54753 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.76■□□□□ 0.43
EPHB3P54753 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.76■□□□□ 0.43
EPHB3P54753 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB3P54753 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
EPHB3P54753 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
EPHB3P54753 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
EPHB3P54753 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.76■□□□□ 0.43
EPHB3P54753 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB3P54753 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
EPHB3P54753 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.76■□□□□ 0.43
EPHB3P54753 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.76■□□□□ 0.43
EPHB3P54753 AL009183.1-201ENST00000603760 355 ntBASIC17.76■□□□□ 0.43
EPHB3P54753 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB3P54753 LINC00628-201ENST00000628516 1289 ntBASIC17.76■□□□□ 0.43
EPHB3P54753 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
EPHB3P54753 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB3P54753 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHB3P54753 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
EPHB3P54753 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
EPHB3P54753 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
EPHB3P54753 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.75■□□□□ 0.43
EPHB3P54753 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.75■□□□□ 0.43
EPHB3P54753 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.75■□□□□ 0.43
EPHB3P54753 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
EPHB3P54753 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 AC079140.1-201ENST00000508039 487 ntBASIC17.75■□□□□ 0.43
EPHB3P54753 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.75■□□□□ 0.43
EPHB3P54753 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
EPHB3P54753 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.75■□□□□ 0.43
EPHB3P54753 AL135744.1-201ENST00000565098 629 ntBASIC17.75■□□□□ 0.43
EPHB3P54753 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.75■□□□□ 0.43
EPHB3P54753 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 AP001350.2-201ENST00000625104 1094 ntBASIC17.75■□□□□ 0.43
EPHB3P54753 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHB3P54753 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.75■□□□□ 0.43
EPHB3P54753 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.75■□□□□ 0.43
EPHB3P54753 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB3P54753 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
EPHB3P54753 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB3P54753 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB3P54753 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB3P54753 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
EPHB3P54753 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB3P54753 SLC25A1P3-201ENST00000395415 828 ntBASIC17.74■□□□□ 0.43
EPHB3P54753 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.74■□□□□ 0.43
EPHB3P54753 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.74■□□□□ 0.43
EPHB3P54753 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.74■□□□□ 0.43
EPHB3P54753 DUX4L17-201ENST00000557360 1267 ntBASIC17.74■□□□□ 0.43
EPHB3P54753 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
EPHB3P54753 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.74■□□□□ 0.43
EPHB3P54753 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.74■□□□□ 0.43
EPHB3P54753 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.74■□□□□ 0.43
EPHB3P54753 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB3P54753 AL021920.2-201ENST00000624828 1351 ntBASIC17.74■□□□□ 0.43
EPHB3P54753 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
EPHB3P54753 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB3P54753 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHB3P54753 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.74■□□□□ 0.43
EPHB3P54753 AC116353.5-201ENST00000638148 1699 ntBASIC17.74■□□□□ 0.43
EPHB3P54753 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHB3P54753 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
EPHB3P54753 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHB3P54753 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms