Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDE1AP54750 AL021920.2-201ENST00000624828 1351 ntBASIC20.83■□□□□ 0.92
PDE1AP54750 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.83■□□□□ 0.92
PDE1AP54750 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PDE1AP54750 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
PDE1AP54750 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PDE1AP54750 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
PDE1AP54750 PI4KAP1-204ENST00000612579 1703 ntBASIC20.82■□□□□ 0.92
PDE1AP54750 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.82■□□□□ 0.92
PDE1AP54750 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.82■□□□□ 0.92
PDE1AP54750 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.82■□□□□ 0.92
PDE1AP54750 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.82■□□□□ 0.92
PDE1AP54750 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.82■□□□□ 0.92
PDE1AP54750 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.82■□□□□ 0.92
PDE1AP54750 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.82■□□□□ 0.92
PDE1AP54750 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.82■□□□□ 0.92
PDE1AP54750 AF228730.7-201ENST00000641842 219 ntBASIC20.82■□□□□ 0.92
PDE1AP54750 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.82■□□□□ 0.92
PDE1AP54750 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PDE1AP54750 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE1AP54750 AC002310.6-201ENST00000624451 1377 ntBASIC20.82■□□□□ 0.92
PDE1AP54750 AL603756.1-201ENST00000606511 2163 ntBASIC20.82■□□□□ 0.92
PDE1AP54750 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE1AP54750 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE1AP54750 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PDE1AP54750 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE1AP54750 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
PDE1AP54750 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE1AP54750 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE1AP54750 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE1AP54750 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDE1AP54750 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.81■□□□□ 0.92
PDE1AP54750 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PDE1AP54750 FAAHP1-202ENST00000446499 1238 ntBASIC20.81■□□□□ 0.92
PDE1AP54750 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.81■□□□□ 0.92
PDE1AP54750 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.81■□□□□ 0.92
PDE1AP54750 RPS15P9-201ENST00000494093 319 ntBASIC20.81■□□□□ 0.92
PDE1AP54750 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDE1AP54750 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE1AP54750 AP002469.2-201ENST00000531724 424 ntBASIC20.81■□□□□ 0.92
PDE1AP54750 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE1AP54750 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.81■□□□□ 0.92
PDE1AP54750 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE1AP54750 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDE1AP54750 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDE1AP54750 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.81■□□□□ 0.92
PDE1AP54750 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE1AP54750 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE1AP54750 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE1AP54750 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.81■□□□□ 0.92
PDE1AP54750 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE1AP54750 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE1AP54750 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.8■□□□□ 0.92
PDE1AP54750 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE1AP54750 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE1AP54750 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE1AP54750 AL391256.1-201ENST00000443260 1855 ntBASIC20.8■□□□□ 0.92
PDE1AP54750 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PDE1AP54750 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE1AP54750 LINC00895-201ENST00000629028 1637 ntBASIC20.8■□□□□ 0.92
PDE1AP54750 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE1AP54750 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE1AP54750 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE1AP54750 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.8■□□□□ 0.92
PDE1AP54750 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE1AP54750 AF186996.4-201ENST00000467186 377 ntBASIC20.8■□□□□ 0.92
PDE1AP54750 SLC25A6P2-201ENST00000497974 877 ntBASIC20.8■□□□□ 0.92
PDE1AP54750 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.8■□□□□ 0.92
PDE1AP54750 AC136632.2-201ENST00000512891 861 ntBASIC20.8■□□□□ 0.92
PDE1AP54750 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.8■□□□□ 0.92
PDE1AP54750 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
PDE1AP54750 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.8■□□□□ 0.92
PDE1AP54750 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE1AP54750 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PDE1AP54750 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
PDE1AP54750 REXO1L3P-201ENST00000622202 1288 ntBASIC20.8■□□□□ 0.92
PDE1AP54750 FAM215A-202ENST00000632077 792 ntBASIC20.8■□□□□ 0.92
PDE1AP54750 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.8■□□□□ 0.92
PDE1AP54750 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PDE1AP54750 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE1AP54750 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PDE1AP54750 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE1AP54750 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PDE1AP54750 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE1AP54750 AP002414.3-201ENST00000589352 1468 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms