Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF144AP50876 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF144AP50876 SPDYE21P-201ENST00000413323 827 ntBASIC15.92■□□□□ 0.14
RNF144AP50876 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF144AP50876 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF144AP50876 UNC93B7-201ENST00000509439 705 ntBASIC15.92■□□□□ 0.14
RNF144AP50876 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF144AP50876 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF144AP50876 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF144AP50876 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF144AP50876 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF144AP50876 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF144AP50876 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RNF144AP50876 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF144AP50876 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF144AP50876 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF144AP50876 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF144AP50876 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF144AP50876 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF144AP50876 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF144AP50876 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RNF144AP50876 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 AC097637.2-201ENST00000624096 1997 ntBASIC15.91■□□□□ 0.14
RNF144AP50876 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 FER1L4-210ENST00000615531 5998 ntBASIC15.91■□□□□ 0.14
RNF144AP50876 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF144AP50876 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF144AP50876 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 AKR1C7P-201ENST00000305623 895 ntBASIC15.91■□□□□ 0.14
RNF144AP50876 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF144AP50876 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.91■□□□□ 0.14
RNF144AP50876 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 TSPY19P-201ENST00000418461 509 ntBASIC15.91■□□□□ 0.14
RNF144AP50876 TSPY18P-201ENST00000441642 509 ntBASIC15.91■□□□□ 0.14
RNF144AP50876 SERPINA7P1-201ENST00000443077 631 ntBASIC15.91■□□□□ 0.14
RNF144AP50876 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.91■□□□□ 0.14
RNF144AP50876 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.91■□□□□ 0.14
RNF144AP50876 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 MTDHP3-201ENST00000594186 672 ntBASIC15.91■□□□□ 0.14
RNF144AP50876 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.91■□□□□ 0.14
RNF144AP50876 AL121772.3-201ENST00000610840 674 ntBASIC15.91■□□□□ 0.14
RNF144AP50876 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RNF144AP50876 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RNF144AP50876 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF144AP50876 LINC02012-201ENST00000608206 1725 ntBASIC15.91■□□□□ 0.14
RNF144AP50876 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RNF144AP50876 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF144AP50876 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF144AP50876 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF144AP50876 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF144AP50876 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF144AP50876 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF144AP50876 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF144AP50876 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF144AP50876 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF144AP50876 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF144AP50876 AL020989.1-201ENST00000422979 469 ntBASIC15.9■□□□□ 0.14
RNF144AP50876 NUS1P1-201ENST00000446295 882 ntBASIC15.9■□□□□ 0.14
RNF144AP50876 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF144AP50876 IFNL4P1-201ENST00000607083 540 ntBASIC15.9■□□□□ 0.14
RNF144AP50876 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RNF144AP50876 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF144AP50876 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF144AP50876 AP005117.1-201ENST00000584346 1413 ntBASIC15.9■□□□□ 0.14
RNF144AP50876 RNF216P1-203ENST00000404404 2427 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms