Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC10.89□□□□□ -0.67
UBE2AP49459 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC10.89□□□□□ -0.67
UBE2AP49459 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC10.89□□□□□ -0.67
UBE2AP49459 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBE2AP49459 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
UBE2AP49459 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2AP49459 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
UBE2AP49459 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 PCDHA12-202ENST00000613593 2588 ntBASIC10.88□□□□□ -0.67
UBE2AP49459 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2AP49459 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC10.88□□□□□ -0.67
UBE2AP49459 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC10.88□□□□□ -0.67
UBE2AP49459 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
UBE2AP49459 REXO1L11P-201ENST00000620964 1927 ntBASIC10.88□□□□□ -0.67
UBE2AP49459 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2AP49459 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2AP49459 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC10.88□□□□□ -0.67
UBE2AP49459 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2AP49459 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
UBE2AP49459 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2AP49459 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC10.88□□□□□ -0.67
UBE2AP49459 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 AC087388.1-201ENST00000571370 1112 ntBASIC10.88□□□□□ -0.67
UBE2AP49459 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC10.88□□□□□ -0.67
UBE2AP49459 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC10.88□□□□□ -0.67
UBE2AP49459 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC10.88□□□□□ -0.67
UBE2AP49459 AL121672.3-201ENST00000608644 468 ntBASIC10.88□□□□□ -0.67
UBE2AP49459 AL592071.1-201ENST00000611956 408 ntBASIC10.88□□□□□ -0.67
UBE2AP49459 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC10.88□□□□□ -0.67
UBE2AP49459 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
UBE2AP49459 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2AP49459 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC10.88□□□□□ -0.67
UBE2AP49459 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
UBE2AP49459 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC10.88□□□□□ -0.67
UBE2AP49459 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 PP12613-201ENST00000424958 2230 ntBASIC10.88□□□□□ -0.67
UBE2AP49459 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
UBE2AP49459 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBE2AP49459 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
UBE2AP49459 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2AP49459 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2AP49459 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2AP49459 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
UBE2AP49459 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2AP49459 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2AP49459 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms