Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC34P49427 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC34P49427 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDC34P49427 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC34P49427 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC34P49427 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CDC34P49427 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.54□□□□□ -0.24
CDC34P49427 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC34P49427 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CDC34P49427 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.54□□□□□ -0.24
CDC34P49427 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDC34P49427 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CDC34P49427 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC34P49427 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDC34P49427 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CDC34P49427 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC34P49427 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.54□□□□□ -0.24
CDC34P49427 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC34P49427 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.54□□□□□ -0.24
CDC34P49427 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.54□□□□□ -0.24
CDC34P49427 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
CDC34P49427 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC34P49427 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.54□□□□□ -0.24
CDC34P49427 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.54□□□□□ -0.24
CDC34P49427 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.54□□□□□ -0.24
CDC34P49427 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.54□□□□□ -0.24
CDC34P49427 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.54□□□□□ -0.24
CDC34P49427 AC009154.2-201ENST00000621177 724 ntBASIC13.54□□□□□ -0.24
CDC34P49427 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.54□□□□□ -0.24
CDC34P49427 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC34P49427 AC116562.4-202ENST00000641738 218 ntBASIC13.54□□□□□ -0.24
CDC34P49427 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC34P49427 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
CDC34P49427 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC34P49427 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC34P49427 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC34P49427 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CDC34P49427 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC34P49427 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC34P49427 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.54□□□□□ -0.24
CDC34P49427 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CDC34P49427 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.54□□□□□ -0.24
CDC34P49427 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC34P49427 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDC34P49427 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC34P49427 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC34P49427 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC34P49427 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC34P49427 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CDC34P49427 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CDC34P49427 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CDC34P49427 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.53□□□□□ -0.24
CDC34P49427 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.53□□□□□ -0.24
CDC34P49427 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CDC34P49427 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.53□□□□□ -0.24
CDC34P49427 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.53□□□□□ -0.24
CDC34P49427 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 HLA-A-202ENST00000376806 1854 ntBASIC13.53□□□□□ -0.24
CDC34P49427 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 AL365203.3-201ENST00000609742 2057 ntBASIC13.53□□□□□ -0.24
CDC34P49427 MYCLP1-201ENST00000372451 1075 ntBASIC13.53□□□□□ -0.24
CDC34P49427 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.53□□□□□ -0.24
CDC34P49427 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.53□□□□□ -0.24
CDC34P49427 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.53□□□□□ -0.24
CDC34P49427 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.53□□□□□ -0.24
CDC34P49427 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.53□□□□□ -0.24
CDC34P49427 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.53□□□□□ -0.24
CDC34P49427 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.53□□□□□ -0.24
CDC34P49427 KRT89P-201ENST00000620027 1478 ntBASIC13.53□□□□□ -0.24
CDC34P49427 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.53□□□□□ -0.24
CDC34P49427 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.53□□□□□ -0.24
CDC34P49427 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.53□□□□□ -0.24
CDC34P49427 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC34P49427 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDC34P49427 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CDC34P49427 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
CDC34P49427 AC024909.3-201ENST00000611513 2257 ntBASIC13.52□□□□□ -0.24
CDC34P49427 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms