Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.09■□□□□ 0.49
BRCC3P46736 SLC22A20-204ENST00000530038 1673 ntBASIC18.09■□□□□ 0.49
BRCC3P46736 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.09■□□□□ 0.49
BRCC3P46736 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.09■□□□□ 0.49
BRCC3P46736 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.09■□□□□ 0.49
BRCC3P46736 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.09■□□□□ 0.49
BRCC3P46736 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
BRCC3P46736 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
BRCC3P46736 AL355306.1-201ENST00000415580 579 ntBASIC18.09■□□□□ 0.49
BRCC3P46736 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.09■□□□□ 0.49
BRCC3P46736 AL671277.1-201ENST00000429656 993 ntBASIC18.09■□□□□ 0.49
BRCC3P46736 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
BRCC3P46736 TIMM8BP1-201ENST00000452384 211 ntBASIC18.09■□□□□ 0.49
BRCC3P46736 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.09■□□□□ 0.49
BRCC3P46736 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.09■□□□□ 0.49
BRCC3P46736 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.09■□□□□ 0.49
BRCC3P46736 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRCC3P46736 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.09■□□□□ 0.49
BRCC3P46736 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BRCC3P46736 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
BRCC3P46736 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BRCC3P46736 AL121761.2-201ENST00000598007 1648 ntBASIC18.09■□□□□ 0.49
BRCC3P46736 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
BRCC3P46736 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
BRCC3P46736 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
BRCC3P46736 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRCC3P46736 AL353732.1-201ENST00000569618 1459 ntBASIC18.08■□□□□ 0.49
BRCC3P46736 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.08■□□□□ 0.49
BRCC3P46736 TOP3BP1-201ENST00000420768 1380 ntBASIC18.08■□□□□ 0.49
BRCC3P46736 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRCC3P46736 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
BRCC3P46736 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRCC3P46736 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
BRCC3P46736 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRCC3P46736 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRCC3P46736 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRCC3P46736 AL139400.1-201ENST00000366220 510 ntBASIC18.08■□□□□ 0.48
BRCC3P46736 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRCC3P46736 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
BRCC3P46736 KRT8P48-201ENST00000515599 1220 ntBASIC18.08■□□□□ 0.48
BRCC3P46736 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
BRCC3P46736 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
BRCC3P46736 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.08■□□□□ 0.48
BRCC3P46736 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.08■□□□□ 0.48
BRCC3P46736 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.08■□□□□ 0.48
BRCC3P46736 AL355385.1-201ENST00000606123 409 ntBASIC18.08■□□□□ 0.48
BRCC3P46736 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.08■□□□□ 0.48
BRCC3P46736 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.08■□□□□ 0.48
BRCC3P46736 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BRCC3P46736 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BRCC3P46736 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.08■□□□□ 0.48
BRCC3P46736 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.08■□□□□ 0.48
BRCC3P46736 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRCC3P46736 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRCC3P46736 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.08■□□□□ 0.48
BRCC3P46736 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRCC3P46736 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRCC3P46736 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.08■□□□□ 0.48
BRCC3P46736 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRCC3P46736 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRCC3P46736 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
BRCC3P46736 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRCC3P46736 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRCC3P46736 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.07■□□□□ 0.48
BRCC3P46736 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
BRCC3P46736 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.07■□□□□ 0.48
BRCC3P46736 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRCC3P46736 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
BRCC3P46736 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.07■□□□□ 0.48
BRCC3P46736 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRCC3P46736 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRCC3P46736 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.07■□□□□ 0.48
BRCC3P46736 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.07■□□□□ 0.48
BRCC3P46736 HMGN1P19-201ENST00000436976 333 ntBASIC18.07■□□□□ 0.48
BRCC3P46736 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
BRCC3P46736 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
BRCC3P46736 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.07■□□□□ 0.48
BRCC3P46736 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.07■□□□□ 0.48
BRCC3P46736 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.07■□□□□ 0.48
BRCC3P46736 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.07■□□□□ 0.48
BRCC3P46736 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms