Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
PRPHP41219 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
PRPHP41219 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PRPHP41219 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 AC136632.2-201ENST00000512891 861 ntBASIC19.28■□□□□ 0.68
PRPHP41219 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.28■□□□□ 0.68
PRPHP41219 AL160237.2-201ENST00000556165 472 ntBASIC19.28■□□□□ 0.68
PRPHP41219 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.28■□□□□ 0.68
PRPHP41219 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.28■□□□□ 0.68
PRPHP41219 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.28■□□□□ 0.68
PRPHP41219 AC106886.4-201ENST00000623557 2502 ntBASIC19.28■□□□□ 0.68
PRPHP41219 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PRPHP41219 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PRPHP41219 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PRPHP41219 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.28■□□□□ 0.68
PRPHP41219 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PRPHP41219 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.28■□□□□ 0.68
PRPHP41219 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PRPHP41219 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.28■□□□□ 0.68
PRPHP41219 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.28■□□□□ 0.68
PRPHP41219 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRPHP41219 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRPHP41219 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRPHP41219 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PRPHP41219 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRPHP41219 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.27■□□□□ 0.68
PRPHP41219 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRPHP41219 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRPHP41219 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRPHP41219 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.27■□□□□ 0.68
PRPHP41219 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.27■□□□□ 0.68
PRPHP41219 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.27■□□□□ 0.68
PRPHP41219 AP002490.2-201ENST00000524791 560 ntBASIC19.27■□□□□ 0.68
PRPHP41219 AP002469.2-201ENST00000531724 424 ntBASIC19.27■□□□□ 0.68
PRPHP41219 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.27■□□□□ 0.68
PRPHP41219 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.27■□□□□ 0.68
PRPHP41219 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.27■□□□□ 0.68
PRPHP41219 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRPHP41219 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PRPHP41219 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PRPHP41219 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRPHP41219 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRPHP41219 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRPHP41219 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRPHP41219 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRPHP41219 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
PRPHP41219 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRPHP41219 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.26■□□□□ 0.67
PRPHP41219 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PRPHP41219 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRPHP41219 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRPHP41219 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRPHP41219 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRPHP41219 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRPHP41219 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRPHP41219 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.26■□□□□ 0.67
PRPHP41219 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.26■□□□□ 0.67
PRPHP41219 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
PRPHP41219 RPS2P28-201ENST00000314255 741 ntBASIC19.26■□□□□ 0.67
PRPHP41219 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.26■□□□□ 0.67
PRPHP41219 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.26■□□□□ 0.67
PRPHP41219 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.26■□□□□ 0.67
PRPHP41219 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.26■□□□□ 0.67
PRPHP41219 AC148477.8-201ENST00000624298 468 ntBASIC19.26■□□□□ 0.67
PRPHP41219 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRPHP41219 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.26■□□□□ 0.67
PRPHP41219 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRPHP41219 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRPHP41219 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.26■□□□□ 0.67
PRPHP41219 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRPHP41219 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRPHP41219 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRPHP41219 NKILA-202ENST00000614771 2598 ntBASIC19.26■□□□□ 0.67
PRPHP41219 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
PRPHP41219 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRPHP41219 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.25■□□□□ 0.67
PRPHP41219 KRT8P49-201ENST00000604166 1432 ntBASIC19.25■□□□□ 0.67
PRPHP41219 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PRPHP41219 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.25■□□□□ 0.67
PRPHP41219 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PRPHP41219 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRPHP41219 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PRPHP41219 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PRPHP41219 PCDHB17P-201ENST00000539533 2393 ntBASIC19.25■□□□□ 0.67
PRPHP41219 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms