Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT20P35900 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT20P35900 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
KRT20P35900 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT20P35900 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT20P35900 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
KRT20P35900 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT20P35900 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT20P35900 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT20P35900 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT20P35900 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KRT20P35900 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KRT20P35900 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT20P35900 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT20P35900 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
KRT20P35900 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KRT20P35900 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT20P35900 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT20P35900 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT20P35900 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT20P35900 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT20P35900 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 NUS1P1-201ENST00000446295 882 ntBASIC16.3■□□□□ 0.2
KRT20P35900 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
KRT20P35900 KRT18P56-201ENST00000507275 550 ntBASIC16.3■□□□□ 0.2
KRT20P35900 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT20P35900 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT20P35900 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.3■□□□□ 0.2
KRT20P35900 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.3■□□□□ 0.2
KRT20P35900 AC011467.2-201ENST00000598425 242 ntBASIC16.3■□□□□ 0.2
KRT20P35900 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT20P35900 AL121772.3-201ENST00000610840 674 ntBASIC16.3■□□□□ 0.2
KRT20P35900 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT20P35900 AC114341.1-201ENST00000618070 349 ntBASIC16.3■□□□□ 0.2
KRT20P35900 DOC2GP-204ENST00000639052 2548 ntBASIC16.3■□□□□ 0.2
KRT20P35900 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KRT20P35900 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KRT20P35900 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
KRT20P35900 MST1L-201ENST00000442552 2185 ntBASIC16.3■□□□□ 0.2
KRT20P35900 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
KRT20P35900 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT20P35900 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KRT20P35900 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.29■□□□□ 0.2
KRT20P35900 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT20P35900 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
KRT20P35900 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT20P35900 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
KRT20P35900 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
KRT20P35900 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT20P35900 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT20P35900 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
KRT20P35900 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT20P35900 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.29■□□□□ 0.2
KRT20P35900 FOSL1P1-201ENST00000511041 816 ntBASIC16.29■□□□□ 0.2
KRT20P35900 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 BNIP3P18-201ENST00000593976 575 ntBASIC16.29■□□□□ 0.2
KRT20P35900 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
KRT20P35900 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT20P35900 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
KRT20P35900 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
KRT20P35900 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT20P35900 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT20P35900 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT20P35900 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT20P35900 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
KRT20P35900 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
KRT20P35900 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT20P35900 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms