Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
COPB2P35606 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.46■□□□□ 0.71
COPB2P35606 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COPB2P35606 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
COPB2P35606 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COPB2P35606 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COPB2P35606 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
COPB2P35606 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.46■□□□□ 0.71
COPB2P35606 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COPB2P35606 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.45■□□□□ 0.7
COPB2P35606 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPB2P35606 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPB2P35606 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COPB2P35606 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
COPB2P35606 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.45■□□□□ 0.7
COPB2P35606 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.45■□□□□ 0.7
COPB2P35606 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
COPB2P35606 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.45■□□□□ 0.7
COPB2P35606 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
COPB2P35606 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
COPB2P35606 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COPB2P35606 CNN2P2-201ENST00000443536 909 ntBASIC19.45■□□□□ 0.7
COPB2P35606 CNN2P3-201ENST00000450201 906 ntBASIC19.45■□□□□ 0.7
COPB2P35606 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.45■□□□□ 0.7
COPB2P35606 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COPB2P35606 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COPB2P35606 AL512356.2-201ENST00000546955 174 ntBASIC19.45■□□□□ 0.7
COPB2P35606 AC091167.2-201ENST00000579581 588 ntBASIC19.45■□□□□ 0.7
COPB2P35606 AL009183.1-201ENST00000603760 355 ntBASIC19.45■□□□□ 0.7
COPB2P35606 AL096865.1-201ENST00000606796 927 ntBASIC19.45■□□□□ 0.7
COPB2P35606 AL136317.3-201ENST00000618497 906 ntBASIC19.45■□□□□ 0.7
COPB2P35606 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPB2P35606 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPB2P35606 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.45■□□□□ 0.7
COPB2P35606 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPB2P35606 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPB2P35606 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.45■□□□□ 0.7
COPB2P35606 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPB2P35606 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
COPB2P35606 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPB2P35606 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
COPB2P35606 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
COPB2P35606 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPB2P35606 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPB2P35606 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPB2P35606 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPB2P35606 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPB2P35606 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPB2P35606 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COPB2P35606 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.44■□□□□ 0.7
COPB2P35606 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COPB2P35606 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COPB2P35606 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.44■□□□□ 0.7
COPB2P35606 KRT18P32-201ENST00000424695 1287 ntBASIC19.44■□□□□ 0.7
COPB2P35606 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPB2P35606 AC069335.1-201ENST00000489972 472 ntBASIC19.44■□□□□ 0.7
COPB2P35606 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.44■□□□□ 0.7
COPB2P35606 KRT8P23-201ENST00000560090 1207 ntBASIC19.44■□□□□ 0.7
COPB2P35606 AC243562.1-201ENST00000560672 389 ntBASIC19.44■□□□□ 0.7
COPB2P35606 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.44■□□□□ 0.7
COPB2P35606 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPB2P35606 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPB2P35606 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPB2P35606 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPB2P35606 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
COPB2P35606 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.43■□□□□ 0.7
COPB2P35606 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
COPB2P35606 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.43■□□□□ 0.7
COPB2P35606 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
COPB2P35606 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
COPB2P35606 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
COPB2P35606 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.43■□□□□ 0.7
COPB2P35606 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.43■□□□□ 0.7
COPB2P35606 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.43■□□□□ 0.7
COPB2P35606 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.43■□□□□ 0.7
COPB2P35606 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.43■□□□□ 0.7
COPB2P35606 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.43■□□□□ 0.7
COPB2P35606 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
COPB2P35606 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPB2P35606 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms