Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC22.02■■□□□ 1.12
RXRBP28702 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RXRBP28702 AC128714.1-201ENST00000637035 887 ntBASIC22.02■■□□□ 1.12
RXRBP28702 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RXRBP28702 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
RXRBP28702 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RXRBP28702 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
RXRBP28702 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RXRBP28702 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
RXRBP28702 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC22.01■■□□□ 1.11
RXRBP28702 FLJ13224-201ENST00000313737 1514 ntBASIC22.01■■□□□ 1.11
RXRBP28702 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RXRBP28702 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RXRBP28702 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RXRBP28702 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC22.01■■□□□ 1.11
RXRBP28702 ARTN-209ENST00000479128 471 ntTSL 3 BASIC22.01■■□□□ 1.11
RXRBP28702 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC22.01■■□□□ 1.11
RXRBP28702 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC22.01■■□□□ 1.11
RXRBP28702 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
RXRBP28702 SPCS2P2-201ENST00000603270 608 ntBASIC22.01■■□□□ 1.11
RXRBP28702 AL022328.3-201ENST00000607943 679 ntBASIC22.01■■□□□ 1.11
RXRBP28702 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RXRBP28702 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RXRBP28702 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.01■■□□□ 1.11
RXRBP28702 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RXRBP28702 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.01■■□□□ 1.11
RXRBP28702 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.01■■□□□ 1.11
RXRBP28702 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RXRBP28702 AL137060.1-201ENST00000618151 2648 ntBASIC22.01■■□□□ 1.11
RXRBP28702 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC22■■□□□ 1.11
RXRBP28702 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RXRBP28702 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RXRBP28702 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RXRBP28702 RPS2P36-201ENST00000456516 831 ntBASIC22■■□□□ 1.11
RXRBP28702 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC22■■□□□ 1.11
RXRBP28702 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC22■■□□□ 1.11
RXRBP28702 RNA5SP410-201ENST00000516285 106 ntBASIC22■■□□□ 1.11
RXRBP28702 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC22■■□□□ 1.11
RXRBP28702 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RXRBP28702 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC22■■□□□ 1.11
RXRBP28702 AC026740.1-201ENST00000607068 791 ntBASIC22■■□□□ 1.11
RXRBP28702 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC22■■□□□ 1.11
RXRBP28702 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RXRBP28702 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC22■■□□□ 1.11
RXRBP28702 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RXRBP28702 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22■■□□□ 1.11
RXRBP28702 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC22■■□□□ 1.11
RXRBP28702 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RXRBP28702 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC21.99■■□□□ 1.11
RXRBP28702 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RXRBP28702 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.99■■□□□ 1.11
RXRBP28702 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RXRBP28702 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RXRBP28702 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RXRBP28702 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RXRBP28702 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RXRBP28702 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.99■■□□□ 1.11
RXRBP28702 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RXRBP28702 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
RXRBP28702 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
RXRBP28702 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RXRBP28702 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RXRBP28702 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RXRBP28702 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.99■■□□□ 1.11
RXRBP28702 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RXRBP28702 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC21.99■■□□□ 1.11
RXRBP28702 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC21.99■■□□□ 1.11
RXRBP28702 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RXRBP28702 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC21.99■■□□□ 1.11
RXRBP28702 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC21.99■■□□□ 1.11
RXRBP28702 RN7SL560P-201ENST00000577943 264 ntBASIC21.99■■□□□ 1.11
RXRBP28702 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC21.99■■□□□ 1.11
RXRBP28702 AC020765.3-201ENST00000613051 740 ntBASIC21.99■■□□□ 1.11
RXRBP28702 AC009542.2-202ENST00000619004 1067 ntBASIC21.99■■□□□ 1.11
RXRBP28702 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.99■■□□□ 1.11
RXRBP28702 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RXRBP28702 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.99■■□□□ 1.11
RXRBP28702 EGFEM1P-202ENST00000431685 1563 ntBASIC21.99■■□□□ 1.11
RXRBP28702 AL157384.1-201ENST00000445995 2473 ntBASIC21.99■■□□□ 1.11
RXRBP28702 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.98■■□□□ 1.11
RXRBP28702 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RXRBP28702 NOC2LP1-202ENST00000452600 2235 ntBASIC21.98■■□□□ 1.11
RXRBP28702 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
RXRBP28702 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC21.98■■□□□ 1.11
RXRBP28702 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RXRBP28702 RERG-205ENST00000537647 935 ntTSL 2 BASIC21.98■■□□□ 1.11
RXRBP28702 AP000812.2-201ENST00000538934 718 ntBASIC21.98■■□□□ 1.11
RXRBP28702 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC21.98■■□□□ 1.11
RXRBP28702 SUOX-214ENST00000551841 906 ntTSL 3 BASIC21.98■■□□□ 1.11
RXRBP28702 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.98■■□□□ 1.11
RXRBP28702 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RXRBP28702 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC21.98■■□□□ 1.11
RXRBP28702 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RXRBP28702 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RXRBP28702 PCDHAC2-203ENST00000615316 3011 ntBASIC21.98■■□□□ 1.11
RXRBP28702 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.98■■□□□ 1.11
RXRBP28702 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RXRBP28702 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.98■■□□□ 1.11
RXRBP28702 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC21.98■■□□□ 1.11
RXRBP28702 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms