Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 BX088651.1-201ENST00000540551 451 ntBASIC14.84□□□□□ -0.03
HLA-DMAP28067 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 AP005242.2-201ENST00000580065 1175 ntBASIC14.84□□□□□ -0.03
HLA-DMAP28067 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 AC024243.1-201ENST00000609234 778 ntBASIC14.84□□□□□ -0.03
HLA-DMAP28067 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 AC006538.1-201ENST00000567905 1585 ntBASIC14.84□□□□□ -0.03
HLA-DMAP28067 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DMAP28067 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DMAP28067 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.03
HLA-DMAP28067 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DMAP28067 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.83□□□□□ -0.03
HLA-DMAP28067 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DMAP28067 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
HLA-DMAP28067 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DMAP28067 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DMAP28067 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.83□□□□□ -0.03
HLA-DMAP28067 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DMAP28067 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DMAP28067 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DMAP28067 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DMAP28067 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DMAP28067 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DMAP28067 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DMAP28067 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DMAP28067 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DMAP28067 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DMAP28067 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DMAP28067 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DMAP28067 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DMAP28067 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DMAP28067 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DMAP28067 SEC1P-202ENST00000473944 940 ntBASIC14.83□□□□□ -0.04
HLA-DMAP28067 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DMAP28067 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DMAP28067 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DMAP28067 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DMAP28067 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DMAP28067 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DMAP28067 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DMAP28067 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DMAP28067 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DMAP28067 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DMAP28067 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DMAP28067 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DMAP28067 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DMAP28067 AC092338.2-201ENST00000568827 1415 ntBASIC14.83□□□□□ -0.04
HLA-DMAP28067 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DMAP28067 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DMAP28067 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DMAP28067 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DMAP28067 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DMAP28067 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DMAP28067 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DMAP28067 BX276092.7-203ENST00000637198 1536 ntBASIC14.82□□□□□ -0.04
HLA-DMAP28067 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DMAP28067 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DMAP28067 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DMAP28067 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DMAP28067 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DMAP28067 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DMAP28067 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DMAP28067 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DMAP28067 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DMAP28067 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DMAP28067 MIR935-201ENST00000401179 91 ntBASIC14.82□□□□□ -0.04
HLA-DMAP28067 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DMAP28067 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.82□□□□□ -0.04
HLA-DMAP28067 CCR12P-201ENST00000446203 998 ntBASIC14.82□□□□□ -0.04
HLA-DMAP28067 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DMAP28067 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DMAP28067 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
HLA-DMAP28067 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
HLA-DMAP28067 AL359736.2-201ENST00000621992 437 ntBASIC14.82□□□□□ -0.04
HLA-DMAP28067 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DMAP28067 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DMAP28067 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DMAP28067 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DMAP28067 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DMAP28067 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DMAP28067 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DMAP28067 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DMAP28067 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms