Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMLP26374 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMLP26374 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
CHMLP26374 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMLP26374 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.56■□□□□ 0.88
CHMLP26374 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMLP26374 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMLP26374 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.56■□□□□ 0.88
CHMLP26374 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMLP26374 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMLP26374 LAGE3P1-201ENST00000425356 484 ntBASIC20.56■□□□□ 0.88
CHMLP26374 KRT18P27-201ENST00000427733 1299 ntBASIC20.56■□□□□ 0.88
CHMLP26374 RPS2P1-201ENST00000434010 821 ntBASIC20.56■□□□□ 0.88
CHMLP26374 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMLP26374 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMLP26374 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMLP26374 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.56■□□□□ 0.88
CHMLP26374 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMLP26374 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CHMLP26374 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMLP26374 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMLP26374 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMLP26374 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
CHMLP26374 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMLP26374 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
CHMLP26374 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMLP26374 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CHMLP26374 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMLP26374 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CHMLP26374 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMLP26374 LINC00895-201ENST00000629028 1637 ntBASIC20.56■□□□□ 0.88
CHMLP26374 HLA-A-202ENST00000376806 1854 ntBASIC20.56■□□□□ 0.88
CHMLP26374 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CHMLP26374 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMLP26374 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CHMLP26374 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.56■□□□□ 0.88
CHMLP26374 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMLP26374 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.55■□□□□ 0.88
CHMLP26374 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.55■□□□□ 0.88
CHMLP26374 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHMLP26374 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.55■□□□□ 0.88
CHMLP26374 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMLP26374 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.55■□□□□ 0.88
CHMLP26374 PCDHB19P-201ENST00000570871 2371 ntBASIC20.55■□□□□ 0.88
CHMLP26374 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMLP26374 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMLP26374 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMLP26374 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.55■□□□□ 0.88
CHMLP26374 AC073621.1-201ENST00000392730 636 ntBASIC20.55■□□□□ 0.88
CHMLP26374 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CHMLP26374 HNRNPDP1-201ENST00000439535 754 ntBASIC20.55■□□□□ 0.88
CHMLP26374 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.55■□□□□ 0.88
CHMLP26374 AL691432.3-201ENST00000621860 400 ntBASIC20.55■□□□□ 0.88
CHMLP26374 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
CHMLP26374 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CHMLP26374 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHMLP26374 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHMLP26374 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMLP26374 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
CHMLP26374 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMLP26374 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHMLP26374 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMLP26374 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMLP26374 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CHMLP26374 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMLP26374 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMLP26374 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMLP26374 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMLP26374 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.54■□□□□ 0.88
CHMLP26374 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHMLP26374 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMLP26374 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMLP26374 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMLP26374 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMLP26374 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMLP26374 AC087163.2-201ENST00000457299 853 ntBASIC20.54■□□□□ 0.88
CHMLP26374 RNPS1P1-201ENST00000507437 918 ntBASIC20.54■□□□□ 0.88
CHMLP26374 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMLP26374 AP002490.2-201ENST00000524791 560 ntBASIC20.54■□□□□ 0.88
CHMLP26374 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.54■□□□□ 0.88
CHMLP26374 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CHMLP26374 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.54■□□□□ 0.88
CHMLP26374 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.54■□□□□ 0.88
CHMLP26374 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHMLP26374 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.54■□□□□ 0.88
CHMLP26374 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.54■□□□□ 0.88
CHMLP26374 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.54■□□□□ 0.88
CHMLP26374 AL805961.1-202ENST00000641562 540 ntBASIC20.54■□□□□ 0.88
CHMLP26374 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMLP26374 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMLP26374 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMLP26374 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMLP26374 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMLP26374 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMLP26374 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMLP26374 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.54■□□□□ 0.88
CHMLP26374 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMLP26374 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMLP26374 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMLP26374 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms