Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.94■□□□□ 0.46
MMP8P22894 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
MMP8P22894 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP8P22894 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP8P22894 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.94■□□□□ 0.46
MMP8P22894 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
MMP8P22894 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.94■□□□□ 0.46
MMP8P22894 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP8P22894 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MMP8P22894 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.94■□□□□ 0.46
MMP8P22894 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MMP8P22894 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 LINC00895-201ENST00000629028 1637 ntBASIC17.94■□□□□ 0.46
MMP8P22894 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP8P22894 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP8P22894 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP8P22894 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 PI4KAP1-204ENST00000612579 1703 ntBASIC17.93■□□□□ 0.46
MMP8P22894 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.93■□□□□ 0.46
MMP8P22894 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
MMP8P22894 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
MMP8P22894 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.93■□□□□ 0.46
MMP8P22894 KRT18P67-201ENST00000432816 1264 ntBASIC17.93■□□□□ 0.46
MMP8P22894 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.93■□□□□ 0.46
MMP8P22894 FAAHP1-202ENST00000446499 1238 ntBASIC17.93■□□□□ 0.46
MMP8P22894 AC087163.2-201ENST00000457299 853 ntBASIC17.93■□□□□ 0.46
MMP8P22894 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.93■□□□□ 0.46
MMP8P22894 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.93■□□□□ 0.46
MMP8P22894 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
MMP8P22894 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.93■□□□□ 0.46
MMP8P22894 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.93■□□□□ 0.46
MMP8P22894 AC008735.5-201ENST00000623544 497 ntBASIC17.93■□□□□ 0.46
MMP8P22894 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.93■□□□□ 0.46
MMP8P22894 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MMP8P22894 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
MMP8P22894 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.93■□□□□ 0.46
MMP8P22894 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MMP8P22894 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP8P22894 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP8P22894 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.92■□□□□ 0.46
MMP8P22894 AL391256.1-201ENST00000443260 1855 ntBASIC17.92■□□□□ 0.46
MMP8P22894 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MMP8P22894 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
MMP8P22894 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MMP8P22894 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP8P22894 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP8P22894 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
MMP8P22894 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MMP8P22894 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP8P22894 PCDHA14-201ENST00000506751 2298 ntBASIC17.92■□□□□ 0.46
MMP8P22894 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.92■□□□□ 0.46
MMP8P22894 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.92■□□□□ 0.46
MMP8P22894 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MMP8P22894 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP8P22894 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP8P22894 AC004870.1-201ENST00000315132 882 ntBASIC17.92■□□□□ 0.46
MMP8P22894 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MMP8P22894 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MMP8P22894 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.92■□□□□ 0.46
MMP8P22894 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP8P22894 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.92■□□□□ 0.46
MMP8P22894 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.92■□□□□ 0.46
MMP8P22894 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.92■□□□□ 0.46
MMP8P22894 RPS15P9-201ENST00000494093 319 ntBASIC17.92■□□□□ 0.46
MMP8P22894 AC136632.2-201ENST00000512891 861 ntBASIC17.92■□□□□ 0.46
MMP8P22894 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MMP8P22894 KRT126P-201ENST00000549467 1181 ntBASIC17.92■□□□□ 0.46
MMP8P22894 AC104692.2-201ENST00000603054 253 ntBASIC17.92■□□□□ 0.46
MMP8P22894 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms