Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.12■□□□□ 0.01
MSR1P21757 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.12■□□□□ 0.01
MSR1P21757 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.12■□□□□ 0.01
MSR1P21757 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
MSR1P21757 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.12■□□□□ 0.01
MSR1P21757 CLEC4GP1-201ENST00000596555 870 ntBASIC15.12■□□□□ 0.01
MSR1P21757 AC008608.2-201ENST00000606089 416 ntBASIC15.12■□□□□ 0.01
MSR1P21757 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 REXO1L6P-202ENST00000619970 1078 ntBASIC15.12■□□□□ 0.01
MSR1P21757 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.12■□□□□ 0.01
MSR1P21757 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.12■□□□□ 0.01
MSR1P21757 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MSR1P21757 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
MSR1P21757 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
MSR1P21757 FRMD8P1-201ENST00000440433 1524 ntBASIC15.12■□□□□ 0.01
MSR1P21757 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.12■□□□□ 0.01
MSR1P21757 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.11■□□□□ 0.01
MSR1P21757 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
MSR1P21757 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
MSR1P21757 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
MSR1P21757 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
MSR1P21757 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.11■□□□□ 0.01
MSR1P21757 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.11■□□□□ 0.01
MSR1P21757 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.11■□□□□ 0.01
MSR1P21757 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
MSR1P21757 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.11■□□□□ 0.01
MSR1P21757 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.11■□□□□ 0.01
MSR1P21757 SCARNA2-201ENST00000458748 420 ntBASIC15.11■□□□□ 0.01
MSR1P21757 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.11■□□□□ 0.01
MSR1P21757 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.11■□□□□ 0.01
MSR1P21757 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.11■□□□□ 0.01
MSR1P21757 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.11■□□□□ 0.01
MSR1P21757 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.11■□□□□ 0.01
MSR1P21757 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSR1P21757 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MSR1P21757 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSR1P21757 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.1■□□□□ 0.01
MSR1P21757 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MSR1P21757 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
MSR1P21757 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.1■□□□□ 0.01
MSR1P21757 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSR1P21757 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSR1P21757 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSR1P21757 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSR1P21757 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MSR1P21757 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSR1P21757 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
MSR1P21757 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.1■□□□□ 0.01
MSR1P21757 SAPCD2P3-201ENST00000455031 850 ntBASIC15.1■□□□□ 0.01
MSR1P21757 FGFR3P6-201ENST00000457012 610 ntBASIC15.1■□□□□ 0.01
MSR1P21757 KRT18P56-201ENST00000507275 550 ntBASIC15.1■□□□□ 0.01
MSR1P21757 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.1■□□□□ 0.01
MSR1P21757 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.1■□□□□ 0.01
MSR1P21757 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
MSR1P21757 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.1■□□□□ 0.01
MSR1P21757 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.1■□□□□ 0.01
MSR1P21757 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.1■□□□□ 0.01
MSR1P21757 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.1■□□□□ 0.01
MSR1P21757 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.1■□□□□ 0.01
MSR1P21757 AC012313.10-201ENST00000623509 926 ntBASIC15.1■□□□□ 0.01
MSR1P21757 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
MSR1P21757 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSR1P21757 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSR1P21757 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MSR1P21757 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MSR1P21757 AC092068.3-201ENST00000587894 2016 ntBASIC15.1■□□□□ 0.01
MSR1P21757 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSR1P21757 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
MSR1P21757 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSR1P21757 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
MSR1P21757 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSR1P21757 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MSR1P21757 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms