Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NCLP19338 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 LYSMD4-203ENST00000378904 2122 ntBASIC20.41■□□□□ 0.86
NCLP19338 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NCLP19338 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.4■□□□□ 0.86
NCLP19338 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NCLP19338 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NCLP19338 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NCLP19338 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NCLP19338 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NCLP19338 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NCLP19338 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NCLP19338 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NCLP19338 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NCLP19338 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.4■□□□□ 0.86
NCLP19338 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NCLP19338 PCDHA1-201ENST00000378133 2726 ntBASIC20.4■□□□□ 0.86
NCLP19338 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NCLP19338 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.4■□□□□ 0.86
NCLP19338 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.4■□□□□ 0.86
NCLP19338 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NCLP19338 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.4■□□□□ 0.86
NCLP19338 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NCLP19338 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.4■□□□□ 0.86
NCLP19338 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.4■□□□□ 0.86
NCLP19338 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NCLP19338 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NCLP19338 LINC01311-201ENST00000565162 1445 ntBASIC20.4■□□□□ 0.86
NCLP19338 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NCLP19338 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NCLP19338 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.4■□□□□ 0.86
NCLP19338 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
NCLP19338 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NCLP19338 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.4■□□□□ 0.86
NCLP19338 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NCLP19338 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
NCLP19338 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NCLP19338 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NCLP19338 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NCLP19338 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.39■□□□□ 0.86
NCLP19338 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NCLP19338 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
NCLP19338 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.39■□□□□ 0.86
NCLP19338 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
NCLP19338 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.39■□□□□ 0.86
NCLP19338 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NCLP19338 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.39■□□□□ 0.85
NCLP19338 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NCLP19338 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NCLP19338 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NCLP19338 RASA4DP-201ENST00000460726 1199 ntBASIC20.39■□□□□ 0.85
NCLP19338 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.39■□□□□ 0.85
NCLP19338 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.39■□□□□ 0.85
NCLP19338 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.39■□□□□ 0.85
NCLP19338 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
NCLP19338 AC004263.2-201ENST00000617183 678 ntBASIC20.39■□□□□ 0.85
NCLP19338 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NCLP19338 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NCLP19338 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NCLP19338 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.39■□□□□ 0.85
NCLP19338 MYB-241ENST00000616088 3573 ntTSL 5 BASIC20.39■□□□□ 0.85
NCLP19338 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NCLP19338 AL603756.1-201ENST00000606511 2163 ntBASIC20.39■□□□□ 0.85
NCLP19338 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NCLP19338 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
NCLP19338 NORAD-201ENST00000565493 5339 ntBASIC20.39■□□□□ 0.85
NCLP19338 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NCLP19338 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.38■□□□□ 0.85
NCLP19338 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.38■□□□□ 0.85
NCLP19338 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.38■□□□□ 0.85
NCLP19338 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.38■□□□□ 0.85
NCLP19338 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.38■□□□□ 0.85
NCLP19338 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.38■□□□□ 0.85
NCLP19338 VENTXP5-201ENST00000523979 775 ntBASIC20.38■□□□□ 0.85
NCLP19338 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.38■□□□□ 0.85
NCLP19338 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.38■□□□□ 0.85
NCLP19338 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.38■□□□□ 0.85
NCLP19338 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC20.38■□□□□ 0.85
NCLP19338 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 389.8 ms