Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL11A2P13942 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL11A2P13942 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A2P13942 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A2P13942 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A2P13942 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A2P13942 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A2P13942 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
COL11A2P13942 MPDU1-223ENST00000582151 728 ntBASIC20.57■□□□□ 0.88
COL11A2P13942 AL589739.1-201ENST00000607720 493 ntBASIC20.57■□□□□ 0.88
COL11A2P13942 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.57■□□□□ 0.88
COL11A2P13942 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A2P13942 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A2P13942 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
COL11A2P13942 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A2P13942 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A2P13942 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A2P13942 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.57■□□□□ 0.88
COL11A2P13942 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A2P13942 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
COL11A2P13942 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL11A2P13942 BICD1-207ENST00000551848 1962 ntBASIC20.57■□□□□ 0.88
COL11A2P13942 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
COL11A2P13942 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A2P13942 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.56■□□□□ 0.88
COL11A2P13942 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A2P13942 AC093525.9-201ENST00000624961 1746 ntBASIC20.56■□□□□ 0.88
COL11A2P13942 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A2P13942 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.56■□□□□ 0.88
COL11A2P13942 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
COL11A2P13942 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A2P13942 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.56■□□□□ 0.88
COL11A2P13942 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A2P13942 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.56■□□□□ 0.88
COL11A2P13942 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A2P13942 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A2P13942 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A2P13942 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.56■□□□□ 0.88
COL11A2P13942 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A2P13942 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.56■□□□□ 0.88
COL11A2P13942 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.56■□□□□ 0.88
COL11A2P13942 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A2P13942 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A2P13942 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A2P13942 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A2P13942 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A2P13942 RPS2P32-201ENST00000439199 892 ntBASIC20.56■□□□□ 0.88
COL11A2P13942 GNAQP1-201ENST00000444815 1067 ntBASIC20.56■□□□□ 0.88
COL11A2P13942 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL11A2P13942 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.56■□□□□ 0.88
COL11A2P13942 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.56■□□□□ 0.88
COL11A2P13942 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.56■□□□□ 0.88
COL11A2P13942 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.56■□□□□ 0.88
COL11A2P13942 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.56■□□□□ 0.88
COL11A2P13942 CHCHD2P3-201ENST00000603038 451 ntBASIC20.56■□□□□ 0.88
COL11A2P13942 AL033527.4-201ENST00000641026 673 ntBASIC20.56■□□□□ 0.88
COL11A2P13942 AL391825.1-201ENST00000457671 1364 ntBASIC20.55■□□□□ 0.88
COL11A2P13942 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A2P13942 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A2P13942 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A2P13942 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A2P13942 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A2P13942 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A2P13942 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.55■□□□□ 0.88
COL11A2P13942 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A2P13942 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A2P13942 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A2P13942 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A2P13942 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
COL11A2P13942 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A2P13942 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
COL11A2P13942 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
COL11A2P13942 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A2P13942 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A2P13942 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A2P13942 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A2P13942 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A2P13942 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A2P13942 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.55■□□□□ 0.88
COL11A2P13942 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.55■□□□□ 0.88
COL11A2P13942 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL11A2P13942 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
COL11A2P13942 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.54■□□□□ 0.88
COL11A2P13942 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A2P13942 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A2P13942 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A2P13942 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COL11A2P13942 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A2P13942 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A2P13942 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COL11A2P13942 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
COL11A2P13942 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.54■□□□□ 0.88
COL11A2P13942 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.54■□□□□ 0.88
COL11A2P13942 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COL11A2P13942 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.54■□□□□ 0.88
COL11A2P13942 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.54■□□□□ 0.88
COL11A2P13942 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A2P13942 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL11A2P13942 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
COL11A2P13942 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms