Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.69■□□□□ 0.42
CD48P09326 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.69■□□□□ 0.42
CD48P09326 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD48P09326 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.69■□□□□ 0.42
CD48P09326 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD48P09326 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.69■□□□□ 0.42
CD48P09326 AL139424.1-201ENST00000607572 797 ntBASIC17.69■□□□□ 0.42
CD48P09326 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CD48P09326 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.69■□□□□ 0.42
CD48P09326 AL589182.2-201ENST00000619332 1049 ntBASIC17.69■□□□□ 0.42
CD48P09326 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD48P09326 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.69■□□□□ 0.42
CD48P09326 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.69■□□□□ 0.42
CD48P09326 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD48P09326 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.69■□□□□ 0.42
CD48P09326 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD48P09326 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD48P09326 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD48P09326 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.69■□□□□ 0.42
CD48P09326 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD48P09326 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.68■□□□□ 0.42
CD48P09326 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CD48P09326 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CD48P09326 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CD48P09326 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CD48P09326 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.68■□□□□ 0.42
CD48P09326 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.68■□□□□ 0.42
CD48P09326 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.68■□□□□ 0.42
CD48P09326 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.68■□□□□ 0.42
CD48P09326 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 EMBP1-201ENST00000458200 901 ntBASIC17.68■□□□□ 0.42
CD48P09326 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.68■□□□□ 0.42
CD48P09326 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.68■□□□□ 0.42
CD48P09326 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 AC004706.3-202ENST00000621574 984 ntBASIC17.68■□□□□ 0.42
CD48P09326 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.68■□□□□ 0.42
CD48P09326 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.68■□□□□ 0.42
CD48P09326 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CD48P09326 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD48P09326 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CD48P09326 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.67■□□□□ 0.42
CD48P09326 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CD48P09326 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
CD48P09326 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.67■□□□□ 0.42
CD48P09326 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.67■□□□□ 0.42
CD48P09326 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.67■□□□□ 0.42
CD48P09326 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.67■□□□□ 0.42
CD48P09326 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.67■□□□□ 0.42
CD48P09326 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.67■□□□□ 0.42
CD48P09326 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.67■□□□□ 0.42
CD48P09326 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.67■□□□□ 0.42
CD48P09326 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.67■□□□□ 0.42
CD48P09326 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.67■□□□□ 0.42
CD48P09326 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.67■□□□□ 0.42
CD48P09326 TERC-201ENST00000602385 541 ntBASIC17.67■□□□□ 0.42
CD48P09326 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.67■□□□□ 0.42
CD48P09326 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.67■□□□□ 0.42
CD48P09326 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CD48P09326 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 AL603756.1-201ENST00000606511 2163 ntBASIC17.67■□□□□ 0.42
CD48P09326 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CD48P09326 PCDHB19P-201ENST00000570871 2371 ntBASIC17.67■□□□□ 0.42
CD48P09326 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CD48P09326 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.67■□□□□ 0.42
CD48P09326 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD48P09326 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms