Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
PDGFAP04085 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
PDGFAP04085 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
PDGFAP04085 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFAP04085 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFAP04085 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFAP04085 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFAP04085 AC025580.3-201ENST00000617932 1424 ntBASIC16.01■□□□□ 0.15
PDGFAP04085 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFAP04085 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFAP04085 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
PDGFAP04085 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFAP04085 AC008764.6-201ENST00000595909 2069 ntBASIC16.01■□□□□ 0.15
PDGFAP04085 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PDGFAP04085 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFAP04085 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.01■□□□□ 0.15
PDGFAP04085 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFAP04085 AC073592.3-201ENST00000625118 1834 ntBASIC16.01■□□□□ 0.15
PDGFAP04085 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFAP04085 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFAP04085 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFAP04085 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PDGFAP04085 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PDGFAP04085 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PDGFAP04085 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16■□□□□ 0.15
PDGFAP04085 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PDGFAP04085 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PDGFAP04085 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
PDGFAP04085 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PDGFAP04085 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16■□□□□ 0.15
PDGFAP04085 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 AL035633.1-201ENST00000406139 838 ntBASIC16■□□□□ 0.15
PDGFAP04085 ATP6V0CP3-201ENST00000417255 467 ntBASIC16■□□□□ 0.15
PDGFAP04085 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16■□□□□ 0.15
PDGFAP04085 RHOQP3-201ENST00000437982 621 ntBASIC16■□□□□ 0.15
PDGFAP04085 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16■□□□□ 0.15
PDGFAP04085 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16■□□□□ 0.15
PDGFAP04085 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16■□□□□ 0.15
PDGFAP04085 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16■□□□□ 0.15
PDGFAP04085 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PDGFAP04085 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16■□□□□ 0.15
PDGFAP04085 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16■□□□□ 0.15
PDGFAP04085 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PDGFAP04085 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 AC097637.2-201ENST00000624096 1997 ntBASIC16■□□□□ 0.15
PDGFAP04085 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16■□□□□ 0.15
PDGFAP04085 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16■□□□□ 0.15
PDGFAP04085 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDGFAP04085 AD000864.1-201ENST00000624076 2295 ntBASIC15.99■□□□□ 0.15
PDGFAP04085 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PDGFAP04085 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
PDGFAP04085 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.99■□□□□ 0.15
PDGFAP04085 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
PDGFAP04085 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PDGFAP04085 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.99■□□□□ 0.15
PDGFAP04085 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.99■□□□□ 0.15
PDGFAP04085 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.99■□□□□ 0.15
PDGFAP04085 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.99■□□□□ 0.15
PDGFAP04085 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 AC100803.2-201ENST00000562459 1963 ntBASIC15.99■□□□□ 0.15
PDGFAP04085 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
PDGFAP04085 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.99■□□□□ 0.15
PDGFAP04085 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDGFAP04085 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.99■□□□□ 0.15
PDGFAP04085 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.99■□□□□ 0.15
PDGFAP04085 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.99■□□□□ 0.15
PDGFAP04085 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PDGFAP04085 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
PDGFAP04085 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms