Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 RNF216P1-203ENST00000404404 2427 ntBASIC15.75■□□□□ 0.11
NKX2-2O95096 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX2-2O95096 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.74■□□□□ 0.11
NKX2-2O95096 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
NKX2-2O95096 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX2-2O95096 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.74■□□□□ 0.11
NKX2-2O95096 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX2-2O95096 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX2-2O95096 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NKX2-2O95096 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.74■□□□□ 0.11
NKX2-2O95096 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX2-2O95096 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.74■□□□□ 0.11
NKX2-2O95096 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.74■□□□□ 0.11
NKX2-2O95096 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.74■□□□□ 0.11
NKX2-2O95096 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.74■□□□□ 0.11
NKX2-2O95096 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
NKX2-2O95096 AC012640.2-201ENST00000561606 901 ntBASIC15.74■□□□□ 0.11
NKX2-2O95096 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.74■□□□□ 0.11
NKX2-2O95096 AL356488.2-201ENST00000602755 427 ntBASIC15.74■□□□□ 0.11
NKX2-2O95096 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NKX2-2O95096 GGTLC5P-201ENST00000617623 998 ntBASIC15.74■□□□□ 0.11
NKX2-2O95096 MIR1199-201ENST00000621445 119 ntBASIC15.74■□□□□ 0.11
NKX2-2O95096 FAM215A-202ENST00000632077 792 ntBASIC15.74■□□□□ 0.11
NKX2-2O95096 PGM5P2-202ENST00000637225 1043 ntBASIC15.74■□□□□ 0.11
NKX2-2O95096 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
NKX2-2O95096 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NKX2-2O95096 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.74■□□□□ 0.11
NKX2-2O95096 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX2-2O95096 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.74■□□□□ 0.11
NKX2-2O95096 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
NKX2-2O95096 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.74■□□□□ 0.11
NKX2-2O95096 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX2-2O95096 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NKX2-2O95096 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NKX2-2O95096 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX2-2O95096 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX2-2O95096 TOP3BP1-201ENST00000420768 1380 ntBASIC15.74■□□□□ 0.11
NKX2-2O95096 AC002310.6-201ENST00000624451 1377 ntBASIC15.74■□□□□ 0.11
NKX2-2O95096 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NKX2-2O95096 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.74■□□□□ 0.11
NKX2-2O95096 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX2-2O95096 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX2-2O95096 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX2-2O95096 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
NKX2-2O95096 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX2-2O95096 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX2-2O95096 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NKX2-2O95096 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NKX2-2O95096 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.73■□□□□ 0.11
NKX2-2O95096 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX2-2O95096 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NKX2-2O95096 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX2-2O95096 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NKX2-2O95096 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.73■□□□□ 0.11
NKX2-2O95096 AL645728.1-201ENST00000366221 2101 ntBASIC15.73■□□□□ 0.11
NKX2-2O95096 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
NKX2-2O95096 LINC00895-201ENST00000629028 1637 ntBASIC15.73■□□□□ 0.11
NKX2-2O95096 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NKX2-2O95096 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.73■□□□□ 0.11
NKX2-2O95096 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
NKX2-2O95096 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NKX2-2O95096 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
NKX2-2O95096 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.73■□□□□ 0.11
NKX2-2O95096 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NKX2-2O95096 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.73■□□□□ 0.11
NKX2-2O95096 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.73■□□□□ 0.11
NKX2-2O95096 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.73■□□□□ 0.11
NKX2-2O95096 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.73■□□□□ 0.11
NKX2-2O95096 AC008667.4-201ENST00000607370 168 ntBASIC15.73■□□□□ 0.11
NKX2-2O95096 AL773604.1-201ENST00000617417 272 ntBASIC15.73■□□□□ 0.11
NKX2-2O95096 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.73■□□□□ 0.11
NKX2-2O95096 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX2-2O95096 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX2-2O95096 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.73■□□□□ 0.11
NKX2-2O95096 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX2-2O95096 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NKX2-2O95096 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NKX2-2O95096 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.73■□□□□ 0.11
NKX2-2O95096 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX2-2O95096 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX2-2O95096 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.73■□□□□ 0.11
NKX2-2O95096 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.73■□□□□ 0.11
NKX2-2O95096 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NKX2-2O95096 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NKX2-2O95096 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX2-2O95096 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NKX2-2O95096 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NKX2-2O95096 AP002414.3-201ENST00000589352 1468 ntBASIC15.72■□□□□ 0.11
NKX2-2O95096 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NKX2-2O95096 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NKX2-2O95096 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms