Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 KRT18P27-201ENST00000427733 1299 ntBASIC15.23■□□□□ 0.03
TRAF3IP2O43734 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 AC104692.2-201ENST00000603054 253 ntBASIC15.23■□□□□ 0.03
TRAF3IP2O43734 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 AC006504.4-201ENST00000592118 1568 ntBASIC15.23■□□□□ 0.03
TRAF3IP2O43734 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 HNRNPDP1-201ENST00000439535 754 ntBASIC15.22■□□□□ 0.03
TRAF3IP2O43734 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 AF186996.4-201ENST00000467186 377 ntBASIC15.22■□□□□ 0.03
TRAF3IP2O43734 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 AP002469.2-201ENST00000531724 424 ntBASIC15.22■□□□□ 0.03
TRAF3IP2O43734 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 TERC-201ENST00000602385 541 ntBASIC15.22■□□□□ 0.03
TRAF3IP2O43734 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 AL805961.1-202ENST00000641562 540 ntBASIC15.22■□□□□ 0.03
TRAF3IP2O43734 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP2O43734 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 AC073621.1-201ENST00000392730 636 ntBASIC15.21■□□□□ 0.03
TRAF3IP2O43734 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 AC008735.5-201ENST00000623544 497 ntBASIC15.21■□□□□ 0.03
TRAF3IP2O43734 AC148477.8-201ENST00000624298 468 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms