Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
XRCC2O43543 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
XRCC2O43543 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 AL139384.1-201ENST00000612143 3047 ntBASIC14.88□□□□□ -0.03
XRCC2O43543 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
XRCC2O43543 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.88□□□□□ -0.03
XRCC2O43543 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.88□□□□□ -0.03
XRCC2O43543 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 AC097637.2-201ENST00000624096 1997 ntBASIC14.88□□□□□ -0.03
XRCC2O43543 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.88□□□□□ -0.03
XRCC2O43543 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.88□□□□□ -0.03
XRCC2O43543 AC106795.1-205ENST00000512851 1056 ntBASIC14.88□□□□□ -0.03
XRCC2O43543 AP001269.4-201ENST00000609611 512 ntBASIC14.88□□□□□ -0.03
XRCC2O43543 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.88□□□□□ -0.03
XRCC2O43543 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.88□□□□□ -0.03
XRCC2O43543 AL139288.1-201ENST00000623748 933 ntBASIC14.88□□□□□ -0.03
XRCC2O43543 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
XRCC2O43543 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.88□□□□□ -0.03
XRCC2O43543 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
XRCC2O43543 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
XRCC2O43543 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.88□□□□□ -0.03
XRCC2O43543 AC092053.1-201ENST00000605787 1936 ntBASIC14.88□□□□□ -0.03
XRCC2O43543 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XRCC2O43543 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
XRCC2O43543 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.88□□□□□ -0.03
XRCC2O43543 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
XRCC2O43543 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
XRCC2O43543 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
XRCC2O43543 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XRCC2O43543 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
XRCC2O43543 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
XRCC2O43543 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
XRCC2O43543 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.87□□□□□ -0.03
XRCC2O43543 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
XRCC2O43543 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.87□□□□□ -0.03
XRCC2O43543 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XRCC2O43543 PRYP5-201ENST00000451909 266 ntBASIC14.87□□□□□ -0.03
XRCC2O43543 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XRCC2O43543 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.87□□□□□ -0.03
XRCC2O43543 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
XRCC2O43543 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.87□□□□□ -0.03
XRCC2O43543 PRELID1P1-202ENST00000567272 903 ntBASIC14.87□□□□□ -0.03
XRCC2O43543 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.87□□□□□ -0.03
XRCC2O43543 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.87□□□□□ -0.03
XRCC2O43543 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.87□□□□□ -0.03
XRCC2O43543 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XRCC2O43543 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XRCC2O43543 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
XRCC2O43543 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.87□□□□□ -0.03
XRCC2O43543 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
XRCC2O43543 AL118508.1-201ENST00000613502 2345 ntBASIC14.87□□□□□ -0.03
XRCC2O43543 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.87□□□□□ -0.03
XRCC2O43543 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
XRCC2O43543 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
XRCC2O43543 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.87□□□□□ -0.03
XRCC2O43543 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
XRCC2O43543 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.86□□□□□ -0.03
XRCC2O43543 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
XRCC2O43543 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.86□□□□□ -0.03
XRCC2O43543 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.86□□□□□ -0.03
XRCC2O43543 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.86□□□□□ -0.03
XRCC2O43543 LINC01711-201ENST00000598340 967 ntBASIC14.86□□□□□ -0.03
XRCC2O43543 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms