Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.75■■□□□ 1.07
KCNQ3O43525 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNQ3O43525 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KCNQ3O43525 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.75■■□□□ 1.07
KCNQ3O43525 SPCS2P1-201ENST00000561636 679 ntBASIC21.75■■□□□ 1.07
KCNQ3O43525 AC025678.2-201ENST00000562061 970 ntBASIC21.75■■□□□ 1.07
KCNQ3O43525 AL138918.1-201ENST00000568306 659 ntBASIC21.75■■□□□ 1.07
KCNQ3O43525 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
KCNQ3O43525 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.75■■□□□ 1.07
KCNQ3O43525 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNQ3O43525 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.75■■□□□ 1.07
KCNQ3O43525 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.75■■□□□ 1.07
KCNQ3O43525 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.75■■□□□ 1.07
KCNQ3O43525 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KCNQ3O43525 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KCNQ3O43525 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
KCNQ3O43525 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC21.75■■□□□ 1.07
KCNQ3O43525 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.75■■□□□ 1.07
KCNQ3O43525 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
KCNQ3O43525 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
KCNQ3O43525 LINC02012-201ENST00000608206 1725 ntBASIC21.75■■□□□ 1.07
KCNQ3O43525 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
KCNQ3O43525 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
KCNQ3O43525 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNQ3O43525 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
KCNQ3O43525 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNQ3O43525 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNQ3O43525 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.74■■□□□ 1.07
KCNQ3O43525 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
KCNQ3O43525 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNQ3O43525 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNQ3O43525 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNQ3O43525 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNQ3O43525 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
KCNQ3O43525 HCG4-201ENST00000418983 998 ntBASIC21.74■■□□□ 1.07
KCNQ3O43525 KRT18P32-201ENST00000424695 1287 ntBASIC21.74■■□□□ 1.07
KCNQ3O43525 RN7SL589P-201ENST00000481268 310 ntBASIC21.74■■□□□ 1.07
KCNQ3O43525 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC21.74■■□□□ 1.07
KCNQ3O43525 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.74■■□□□ 1.07
KCNQ3O43525 AC091167.2-201ENST00000579581 588 ntBASIC21.74■■□□□ 1.07
KCNQ3O43525 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNQ3O43525 AL161645.1-201ENST00000622716 1255 ntBASIC21.74■■□□□ 1.07
KCNQ3O43525 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNQ3O43525 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.74■■□□□ 1.07
KCNQ3O43525 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21.74■■□□□ 1.07
KCNQ3O43525 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
KCNQ3O43525 AC141586.5-201ENST00000624546 2050 ntBASIC21.74■■□□□ 1.07
KCNQ3O43525 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNQ3O43525 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNQ3O43525 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNQ3O43525 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNQ3O43525 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNQ3O43525 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNQ3O43525 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNQ3O43525 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KCNQ3O43525 KRT8P49-201ENST00000604166 1432 ntBASIC21.73■■□□□ 1.07
KCNQ3O43525 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNQ3O43525 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNQ3O43525 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNQ3O43525 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KCNQ3O43525 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
KCNQ3O43525 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNQ3O43525 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.73■■□□□ 1.07
KCNQ3O43525 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.73■■□□□ 1.07
KCNQ3O43525 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.73■■□□□ 1.07
KCNQ3O43525 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNQ3O43525 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNQ3O43525 BCRP1-201ENST00000444246 691 ntBASIC21.73■■□□□ 1.07
KCNQ3O43525 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNQ3O43525 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
KCNQ3O43525 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.73■■□□□ 1.07
KCNQ3O43525 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
KCNQ3O43525 AC087641.1-201ENST00000557561 1021 ntBASIC21.73■■□□□ 1.07
KCNQ3O43525 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.73■■□□□ 1.07
KCNQ3O43525 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.73■■□□□ 1.07
KCNQ3O43525 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNQ3O43525 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNQ3O43525 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.73■■□□□ 1.07
KCNQ3O43525 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.73■■□□□ 1.07
KCNQ3O43525 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
KCNQ3O43525 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
KCNQ3O43525 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNQ3O43525 AC016027.1-202ENST00000607927 1699 ntBASIC21.72■■□□□ 1.07
KCNQ3O43525 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
KCNQ3O43525 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KCNQ3O43525 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNQ3O43525 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.72■■□□□ 1.07
KCNQ3O43525 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNQ3O43525 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNQ3O43525 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
KCNQ3O43525 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.72■■□□□ 1.07
KCNQ3O43525 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
KCNQ3O43525 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KCNQ3O43525 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNQ3O43525 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KCNQ3O43525 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.72■■□□□ 1.07
KCNQ3O43525 RBPMS2P1-201ENST00000437762 623 ntBASIC21.72■■□□□ 1.07
KCNQ3O43525 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KCNQ3O43525 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KCNQ3O43525 CYP2A7P1-201ENST00000595391 815 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms