Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.03■□□□□ 0.32
PHGDHO43175 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.03■□□□□ 0.32
PHGDHO43175 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
PHGDHO43175 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PHGDHO43175 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PHGDHO43175 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.03■□□□□ 0.32
PHGDHO43175 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.03■□□□□ 0.32
PHGDHO43175 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHGDHO43175 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHGDHO43175 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHGDHO43175 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHGDHO43175 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PHGDHO43175 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHGDHO43175 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHGDHO43175 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.02■□□□□ 0.32
PHGDHO43175 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHGDHO43175 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHGDHO43175 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.02■□□□□ 0.32
PHGDHO43175 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHGDHO43175 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.02■□□□□ 0.32
PHGDHO43175 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PHGDHO43175 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
PHGDHO43175 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PHGDHO43175 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PHGDHO43175 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PHGDHO43175 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.02■□□□□ 0.32
PHGDHO43175 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.02■□□□□ 0.32
PHGDHO43175 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PHGDHO43175 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PHGDHO43175 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.02■□□□□ 0.32
PHGDHO43175 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PHGDHO43175 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.02■□□□□ 0.32
PHGDHO43175 AP000867.3-201ENST00000524675 377 ntBASIC17.02■□□□□ 0.32
PHGDHO43175 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.02■□□□□ 0.32
PHGDHO43175 MIR3180-1-201ENST00000580374 94 ntBASIC17.02■□□□□ 0.32
PHGDHO43175 MIR3180-3-201ENST00000584616 94 ntBASIC17.02■□□□□ 0.32
PHGDHO43175 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHGDHO43175 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.02■□□□□ 0.32
PHGDHO43175 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.02■□□□□ 0.32
PHGDHO43175 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHGDHO43175 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.02■□□□□ 0.31
PHGDHO43175 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PHGDHO43175 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PHGDHO43175 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PHGDHO43175 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PHGDHO43175 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.02■□□□□ 0.31
PHGDHO43175 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.01■□□□□ 0.31
PHGDHO43175 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PHGDHO43175 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PHGDHO43175 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PHGDHO43175 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.01■□□□□ 0.31
PHGDHO43175 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.01■□□□□ 0.31
PHGDHO43175 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PHGDHO43175 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.01■□□□□ 0.31
PHGDHO43175 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PHGDHO43175 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 NUS1P1-201ENST00000446295 882 ntBASIC17.01■□□□□ 0.31
PHGDHO43175 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.01■□□□□ 0.31
PHGDHO43175 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.01■□□□□ 0.31
PHGDHO43175 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.01■□□□□ 0.31
PHGDHO43175 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.01■□□□□ 0.31
PHGDHO43175 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.01■□□□□ 0.31
PHGDHO43175 AC114341.1-201ENST00000618070 349 ntBASIC17.01■□□□□ 0.31
PHGDHO43175 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PHGDHO43175 AL590326.2-201ENST00000625139 305 ntBASIC17.01■□□□□ 0.31
PHGDHO43175 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.01■□□□□ 0.31
PHGDHO43175 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.01■□□□□ 0.31
PHGDHO43175 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.01■□□□□ 0.31
PHGDHO43175 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.01■□□□□ 0.31
PHGDHO43175 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.01■□□□□ 0.31
PHGDHO43175 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.01■□□□□ 0.31
PHGDHO43175 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.01■□□□□ 0.31
PHGDHO43175 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.01■□□□□ 0.31
PHGDHO43175 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.01■□□□□ 0.31
PHGDHO43175 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.01■□□□□ 0.31
PHGDHO43175 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PHGDHO43175 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHGDHO43175 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
PHGDHO43175 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.01■□□□□ 0.31
PHGDHO43175 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PHGDHO43175 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PHGDHO43175 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.01■□□□□ 0.31
PHGDHO43175 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.01■□□□□ 0.31
PHGDHO43175 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17■□□□□ 0.31
PHGDHO43175 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms