Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHL1O00533 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHL1O00533 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.8■■□□□ 1.08
CHL1O00533 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CHL1O00533 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHL1O00533 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CHL1O00533 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHL1O00533 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.8■■□□□ 1.08
CHL1O00533 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.8■■□□□ 1.08
CHL1O00533 DNAJB3-202ENST00000449667 1266 ntBASIC21.8■■□□□ 1.08
CHL1O00533 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.8■■□□□ 1.08
CHL1O00533 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CHL1O00533 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHL1O00533 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.8■■□□□ 1.08
CHL1O00533 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHL1O00533 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHL1O00533 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CHL1O00533 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHL1O00533 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHL1O00533 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CHL1O00533 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHL1O00533 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CHL1O00533 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.79■■□□□ 1.08
CHL1O00533 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHL1O00533 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CHL1O00533 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.79■■□□□ 1.08
CHL1O00533 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.79■■□□□ 1.08
CHL1O00533 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.79■■□□□ 1.08
CHL1O00533 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.79■■□□□ 1.08
CHL1O00533 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.79■■□□□ 1.08
CHL1O00533 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CHL1O00533 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.79■■□□□ 1.08
CHL1O00533 MIR3909-201ENST00000579518 119 ntBASIC21.79■■□□□ 1.08
CHL1O00533 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.79■■□□□ 1.08
CHL1O00533 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHL1O00533 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHL1O00533 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHL1O00533 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC21.79■■□□□ 1.08
CHL1O00533 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHL1O00533 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHL1O00533 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CHL1O00533 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
CHL1O00533 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHL1O00533 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CHL1O00533 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHL1O00533 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.79■■□□□ 1.08
CHL1O00533 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHL1O00533 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHL1O00533 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHL1O00533 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHL1O00533 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CHL1O00533 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHL1O00533 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHL1O00533 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
CHL1O00533 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHL1O00533 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.78■■□□□ 1.08
CHL1O00533 AL645728.1-201ENST00000366221 2101 ntBASIC21.78■■□□□ 1.08
CHL1O00533 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHL1O00533 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHL1O00533 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHL1O00533 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.78■■□□□ 1.08
CHL1O00533 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
CHL1O00533 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.78■■□□□ 1.08
CHL1O00533 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.78■■□□□ 1.08
CHL1O00533 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CHL1O00533 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.78■■□□□ 1.08
CHL1O00533 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.78■■□□□ 1.08
CHL1O00533 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CHL1O00533 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.78■■□□□ 1.08
CHL1O00533 AC105339.1-204ENST00000636249 355 ntBASIC21.78■■□□□ 1.08
CHL1O00533 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.78■■□□□ 1.08
CHL1O00533 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHL1O00533 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CHL1O00533 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHL1O00533 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHL1O00533 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHL1O00533 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CHL1O00533 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHL1O00533 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.77■■□□□ 1.08
CHL1O00533 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHL1O00533 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CHL1O00533 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.77■■□□□ 1.08
CHL1O00533 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.77■■□□□ 1.08
CHL1O00533 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CHL1O00533 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHL1O00533 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC21.77■■□□□ 1.08
CHL1O00533 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHL1O00533 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.77■■□□□ 1.08
CHL1O00533 AL355306.1-201ENST00000415580 579 ntBASIC21.77■■□□□ 1.08
CHL1O00533 AC254562.1-201ENST00000417586 456 ntBASIC21.77■■□□□ 1.08
CHL1O00533 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CHL1O00533 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CHL1O00533 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHL1O00533 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
CHL1O00533 AP001350.2-201ENST00000625104 1094 ntBASIC21.77■■□□□ 1.08
CHL1O00533 AL513210.1-201ENST00000629608 234 ntBASIC21.77■■□□□ 1.08
CHL1O00533 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CHL1O00533 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHL1O00533 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHL1O00533 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms